Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0855
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   3.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 199 DICFFYLTIDGVTFVECP*VLVL 267
           D CFF+ TI    F E P V+ L
Sbjct: 433 DPCFFHDTIPPYLFFESPPVVFL 455


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 199 DICFFYLTIDGVTFVECP*VLVL 267
           D CFF+ TI    F E P V+ L
Sbjct: 433 DPCFFHDTIPPYLFFESPPVVFL 455


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 199 DICFFYLTIDGVTFVECP*VLVL 267
           D CFF+ TI    F E P V+ L
Sbjct: 433 DPCFFHDTIPPYLFFESPPVVFL 455


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 199 DICFFYLTIDGVTFVECP*VLVL 267
           D CFF+ TI    F E P V+ L
Sbjct: 433 DPCFFHDTIPPYLFFESPPVVFL 455


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
 Frame = +1

Query: 28  DSARNGNFWVLQRDFGSLY---CYM 93
           D    G+FW L  D G+++   CY+
Sbjct: 206 DKPGKGSFWSLHPDSGNMFENGCYL 230


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 275 TNIKTSTQGHSTNVTPSIVK*KKQISKRIVEICSDGDRC 159
           +N+ TS   HST++   IVK  + +  +I  +  + + C
Sbjct: 192 SNLNTSLI-HSTHLNGDIVKEHQNLHNKICNLIDEFNEC 229


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = -1

Query: 399 KSILTTSYFFKTYRMTTYFRILQMLIVLCW*E*RHLSL 286
           + I+  SYF  T  +  ++++++ ++     E  HLS+
Sbjct: 53  QEIIPKSYFGTTTNLKRFYKVVEKILTQSSFECIHLSV 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,858
Number of Sequences: 336
Number of extensions: 4045
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)