Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0853
         (772 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RHF3 Cluster: Putative uncharacterized protein PY0403...    35   1.9  
UniRef50_A3U9C4 Cluster: Endonuclease/exonuclease/phosphatase; n...    34   3.4  

>UniRef50_Q7RHF3 Cluster: Putative uncharacterized protein PY04034;
           n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04034 - Plasmodium yoelii yoelii
          Length = 1967

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 24/71 (33%), Positives = 35/71 (49%)
 Frame = -1

Query: 370 FNNMWKQATSSFFRTINVLNGKFNDFFFHSKLNNLKPPKRSELSRILVSNELRIILMHLG 191
           FN M K   S   R  N ++ K  + + +   NN+K  K+SEL   + SN+   I     
Sbjct: 327 FNEMEKYLRSP--RNENNISSKMLEEYLNYGFNNIKEQKQSELDNYVNSNKKMNINEINN 384

Query: 190 NAIDKEVKDYI 158
           N  +K V+DYI
Sbjct: 385 NNNEKNVRDYI 395


>UniRef50_A3U9C4 Cluster: Endonuclease/exonuclease/phosphatase; n=1;
           Croceibacter atlanticus HTCC2559|Rep:
           Endonuclease/exonuclease/phosphatase - Croceibacter
           atlanticus HTCC2559
          Length = 365

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = -1

Query: 370 FNNM-WKQATSSFFRTINVLNGKFNDFFFHSKLNNLKPPKRSELSRILVSNELRIILMHL 194
           FN++ W Q T+ F R   +L+ +    FF++  N   P  R  L  + VS   R+I + L
Sbjct: 251 FNDVAWSQTTTLFQRISGLLDMRKGRGFFNT-FNANNPLMRWPLDHMFVSEHFRVIEIGL 309

Query: 193 GNAIDKE 173
           GN I+ +
Sbjct: 310 GNDINSD 316


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,714,844
Number of Sequences: 1657284
Number of extensions: 11564651
Number of successful extensions: 24731
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24729
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)