Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0853
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1764 + 29322683-29323387,29323809-29323889,29323968-293240...    29   3.1  
07_01_0126 - 947072-948687,949454-949627,950117-951572                 28   7.2  
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451...    28   9.5  

>07_03_1764 +
           29322683-29323387,29323809-29323889,29323968-29324072,
           29324453-29325382,29326728-29326856,29326953-29327042,
           29327237-29327293,29327362-29327394
          Length = 709

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -1

Query: 562 IRTYLRYLFICRKYNRHSTSEQMITIVDKIFLRLFC---KLFFRESHH 428
           ++  LR+L  CR++      ++  +IVD  + +L C   K  F+E  H
Sbjct: 564 VKDLLRFLRNCRRHAAQFKEDEFPSIVDHFYPKLMCDFQKAMFKEVEH 611


>07_01_0126 - 947072-948687,949454-949627,950117-951572
          Length = 1081

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 376 FFFNNMWKQATSSFFRTINVLNGKF 302
           +FF++ W+    S+ RT+N +N ++
Sbjct: 395 YFFDDPWQAVEPSYIRTVNKINSEY 419


>04_04_1247 -
           32043776-32043880,32044296-32044505,32044595-32045101,
           32045362-32045583,32046054-32046184,32046737-32047745,
           32047830-32047904,32047995-32048066,32048153-32048328,
           32048494-32048646,32048739-32049234
          Length = 1051

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 262 PPKRSELSRILVSNELRIILMHLGNAIDKEVKDYISA 152
           PPK  +LS+I  S E R   M L     ++ K+Y SA
Sbjct: 673 PPKTIQLSKIDFSKEERTFYMMLEEGSREKFKEYASA 709


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,693,196
Number of Sequences: 37544
Number of extensions: 284446
Number of successful extensions: 499
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)