Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0853
         (772 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S65762-1|AAB28324.1| 1252|Homo sapiens beta-fodrin protein.            32   2.0  
M96803-1|AAA60580.1| 2364|Homo sapiens beta-spectrin protein.          32   2.0  
AF327441-1|AAO15362.1| 2155|Homo sapiens beta-spectrin 2 isoform...    32   2.0  
AC093110-1|AAY24229.1| 2314|Homo sapiens unknown protein.              32   2.0  
AB209748-1|BAD92985.1| 2377|Homo sapiens spectrin, beta, non-ery...    32   2.0  

>S65762-1|AAB28324.1| 1252|Homo sapiens beta-fodrin protein.
          Length = 1252

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 280 KLNNLKPPKRSELSRILVSNELRIILMHLGNAIDKEVK 167
           +  +L+P   ++ SR+ V N++   LMH G+  +KE+K
Sbjct: 598 RFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEKEIK 635


>M96803-1|AAA60580.1| 2364|Homo sapiens beta-spectrin protein.
          Length = 2364

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 280  KLNNLKPPKRSELSRILVSNELRIILMHLGNAIDKEVK 167
            +  +L+P   ++ SR+ V N++   LMH G+  +KE+K
Sbjct: 890  RFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEKEIK 927


>AF327441-1|AAO15362.1| 2155|Homo sapiens beta-spectrin 2 isoform 2
           protein.
          Length = 2155

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 280 KLNNLKPPKRSELSRILVSNELRIILMHLGNAIDKEVK 167
           +  +L+P   ++ SR+ V N++   LMH G+  +KE+K
Sbjct: 877 RFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEKEIK 914


>AC093110-1|AAY24229.1| 2314|Homo sapiens unknown protein.
          Length = 2314

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 280 KLNNLKPPKRSELSRILVSNELRIILMHLGNAIDKEVK 167
           +  +L+P   ++ SR+ V N++   LMH G+  +KE+K
Sbjct: 840 RFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEKEIK 877


>AB209748-1|BAD92985.1| 2377|Homo sapiens spectrin, beta,
            non-erythrocytic 1 isoform 1 variant protein.
          Length = 2377

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 280  KLNNLKPPKRSELSRILVSNELRIILMHLGNAIDKEVK 167
            +  +L+P   ++ SR+ V N++   LMH G+  +KE+K
Sbjct: 903  RFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEKEIK 940


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,328,637
Number of Sequences: 237096
Number of extensions: 1647705
Number of successful extensions: 6339
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6339
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)