Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0852
(573 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 166 2e-41
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 166 2e-41
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 166 2e-41
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 166 2e-41
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 166 2e-41
AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA... 29 5.9
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 166 bits (404), Expect = 2e-41
Identities = 79/87 (90%), Positives = 80/87 (91%)
Frame = +2
Query: 248 FLLGPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGXGVKCSKEVATAIRGAI 427
F LG SL D VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG GVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 428 ILAKLSVLPVRRGYWGNKIXKLHTVPC 508
ILAKLSV+PVRRGYWGNKI K HTVPC
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHTVPC 165
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +3
Query: 123 KEDQKEWVPVTKLGRLVREGKIDKLXSIYLFSLPIKEFEIIDFF 254
KED KEWVPVTKLGRLVREGKI L IYL+SLPIKEFEIIDFF
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFF 80
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1
Query: 502 PLXVTGNCXSVTFRLIPAPRGTGI 573
P VTG C SV+ RLIPAPRGTGI
Sbjct: 164 PCKVTGKCGSVSVRLIPAPRGTGI 187
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 166 bits (404), Expect = 2e-41
Identities = 79/87 (90%), Positives = 80/87 (91%)
Frame = +2
Query: 248 FLLGPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGXGVKCSKEVATAIRGAI 427
F LG SL D VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG GVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 428 ILAKLSVLPVRRGYWGNKIXKLHTVPC 508
ILAKLSV+PVRRGYWGNKI K HTVPC
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHTVPC 165
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +3
Query: 123 KEDQKEWVPVTKLGRLVREGKIDKLXSIYLFSLPIKEFEIIDFF 254
KED KEWVPVTKLGRLVREGKI L IYL+SLPIKEFEIIDFF
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFF 80
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1
Query: 502 PLXVTGNCXSVTFRLIPAPRGTGI 573
P VTG C SV+ RLIPAPRGTGI
Sbjct: 164 PCKVTGKCGSVSVRLIPAPRGTGI 187
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 166 bits (404), Expect = 2e-41
Identities = 79/87 (90%), Positives = 80/87 (91%)
Frame = +2
Query: 248 FLLGPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGXGVKCSKEVATAIRGAI 427
F LG SL D VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG GVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 428 ILAKLSVLPVRRGYWGNKIXKLHTVPC 508
ILAKLSV+PVRRGYWGNKI K HTVPC
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHTVPC 165
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +3
Query: 123 KEDQKEWVPVTKLGRLVREGKIDKLXSIYLFSLPIKEFEIIDFF 254
KED KEWVPVTKLGRLVREGKI L IYL+SLPIKEFEIIDFF
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFF 80
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1
Query: 502 PLXVTGNCXSVTFRLIPAPRGTGI 573
P VTG C SV+ RLIPAPRGTGI
Sbjct: 164 PCKVTGKCGSVSVRLIPAPRGTGI 187
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 166 bits (404), Expect = 2e-41
Identities = 79/87 (90%), Positives = 80/87 (91%)
Frame = +2
Query: 248 FLLGPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGXGVKCSKEVATAIRGAI 427
F LG SL D VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG GVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 428 ILAKLSVLPVRRGYWGNKIXKLHTVPC 508
ILAKLSV+PVRRGYWGNKI K HTVPC
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHTVPC 165
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +3
Query: 123 KEDQKEWVPVTKLGRLVREGKIDKLXSIYLFSLPIKEFEIIDFF 254
KED KEWVPVTKLGRLVREGKI L IYL+SLPIKEFEIIDFF
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFF 80
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1
Query: 502 PLXVTGNCXSVTFRLIPAPRGTGI 573
P VTG C SV+ RLIPAPRGTGI
Sbjct: 164 PCKVTGKCGSVSVRLIPAPRGTGI 187
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 166 bits (404), Expect = 2e-41
Identities = 79/87 (90%), Positives = 80/87 (91%)
Frame = +2
Query: 248 FLLGPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGXGVKCSKEVATAIRGAI 427
F LG SL D VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG GVKCSKEVATAIRGAI
Sbjct: 79 FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138
Query: 428 ILAKLSVLPVRRGYWGNKIXKLHTVPC 508
ILAKLSV+PVRRGYWGNKI K HTVPC
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHTVPC 165
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +3
Query: 123 KEDQKEWVPVTKLGRLVREGKIDKLXSIYLFSLPIKEFEIIDFF 254
KED KEWVPVTKLGRLVREGKI L IYL+SLPIKEFEIIDFF
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFF 80
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1
Query: 502 PLXVTGNCXSVTFRLIPAPRGTGI 573
P VTG C SV+ RLIPAPRGTGI
Sbjct: 164 PCKVTGKCGSVSVRLIPAPRGTGI 187
>AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA
protein.
Length = 1307
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 140 VGSCHQTRPSCSRRKNRQTXEHLLVFFTNQRI 235
V SCH RP SRRK+R+ ++ F R+
Sbjct: 816 VSSCH-CRPGYSRRKHREPCRRVISFHLGMRV 846
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,341,304
Number of Sequences: 53049
Number of extensions: 421367
Number of successful extensions: 913
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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