Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0850
(713 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 45 9e-06
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 38 0.001
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 37 0.003
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 36 0.008
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 35 0.013
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 32 0.071
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 31 0.16
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 30 0.29
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.7
SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces po... 26 4.7
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 26 4.7
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 26 4.7
SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase s... 26 4.7
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 26 6.1
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 26 6.1
SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 26 6.1
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 45.2 bits (102), Expect = 9e-06
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +2
Query: 521 PGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSA 673
P L+ +D G TPLHRAA + + L+S A +++ G+TPLH A
Sbjct: 131 PELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFA 181
Score = 35.1 bits (77), Expect = 0.010
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 521 PGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSF-GAKVSSKSELGWTPLHSACN 679
P +++ D D TPLH A ++ I LL K K E GWTPL + N
Sbjct: 27 PNSLNAVDDDKRTPLHWACSVGKVNTIYFLLKQPNIKPDEKDEAGWTPLMISIN 80
Score = 29.1 bits (62), Expect = 0.66
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 509 LVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL 664
L+++ +++ DS G+TPLH A H D L+ GA K T L
Sbjct: 160 LISQRAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGADTLRKDSENHTAL 211
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 533 HSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL 664
++ D +GYTP+H A H D + +L+ G ++ + + G TPL
Sbjct: 31 NAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPL 74
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +2
Query: 530 VHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL 664
V+ RD+ GYTPLH A+ +H D LLS GAK G P+
Sbjct: 888 VNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDVIGASGKKPI 932
Score = 29.9 bits (64), Expect = 0.38
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 542 DSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSA 673
+ G + LH A +A + L + G V+ + LG+TPLH A
Sbjct: 859 NESGRSLLHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYA 902
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 35.5 bits (78), Expect = 0.008
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 542 DSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL 664
D DG+T LH A H++ I LLL A + + L TPL
Sbjct: 245 DDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPL 285
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 34.7 bits (76), Expect = 0.013
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +2
Query: 503 RTLVAKPGL-VHSRDSD-GYTPLHRAAYSNHLDAISLLLS 616
R+L+ G+ V +D + GYT LHRA Y +L+A SLLLS
Sbjct: 69 RSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAASLLLS 108
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 32.3 bits (70), Expect = 0.071
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 530 VHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLH 667
V RD +TPL A+Y + + LL +GA V + E TPLH
Sbjct: 127 VDLRDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPLH 172
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 31.1 bits (67), Expect = 0.16
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 542 DSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPL 664
D DG+T LH AA +L+ + LL GA V + + L T L
Sbjct: 234 DEDGHTALHWAAAMGNLEMMHALLQAGANVVAVNYLQQTSL 274
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 548 DGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSA 673
+ +TPL A+ + + +S+L++ GA V GWT + A
Sbjct: 400 NSWTPLMLASATGLSEIVSILVASGASVDEVDSSGWTAMEQA 441
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 539 RDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTP 661
RD TPL A NH++A+ LLS K ++ ++ G P
Sbjct: 295 RDVMHDTPLTLAIKGNHVEALHALLSAQDKETTSTKPGPVP 335
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 27.1 bits (57), Expect = 2.7
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 288 MSDEDDSDVEAKYFKEISDEIQTLKKNPETS 380
+++E +SD + +Y K++ + + KN ETS
Sbjct: 81 LNEEKESDTQTRYLKQLINICNSPSKNHETS 111
>SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 674
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -1
Query: 683 SNYMQSVMAS---NQVQIYC*PLLQNLAVKILHPN 588
++Y S++ S Q I P+ Q++A+K+LHPN
Sbjct: 275 NSYFTSMLQSIGFRQKNISDAPVTQDVAIKVLHPN 309
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +3
Query: 285 KMSDEDDSDVEAKYFKEISDEIQTLKKNPETSGM 386
K++D D D+E KYF+E+ E + +K+ +++G+
Sbjct: 90 KLNDSSD-DIEGKYFEELLAE-EDEEKDKDSAGL 121
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 276 LIIKMSDEDDSDVEAKYFKEISDEIQTLKKNPET 377
L ++ + ED+ D+ + ++ +QTL K P T
Sbjct: 681 LNVESNAEDEEDISYRTMDQLDPNLQTLSKLPRT 714
>SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase
subunit Dps1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -1
Query: 596 HPNDLNKQLDVVECNHRSLLNEQALVWQLEFSESV*LIVFCSP 468
HP+D+ + +VEC EQ + W E+ + + C P
Sbjct: 319 HPSDIQRARSLVECTDAI---EQTITWAKEYIKKAKDSLLCLP 358
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +2
Query: 509 LVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGW 655
L A P H+ G + YS+ + + LLL S SEL W
Sbjct: 457 LAADPRNYHALLGKGLVQIENEQYSDAVKTLGLLLDDHENDPSLSELSW 505
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 478 NTIS*TLSENSSCQTRACSFKRLRWL 555
+T+ L EN CQ+ C+ K W+
Sbjct: 449 STLGRELDENQPCQSPMCTMKDTNWI 474
>SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 386 HTRRFWIFFQSLYFITYFFEIF 321
+ +R W FF + ++++FFE F
Sbjct: 55 YPKRNWWFFIKMRYLSFFFEFF 76
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,708,531
Number of Sequences: 5004
Number of extensions: 51818
Number of successful extensions: 154
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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