Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0850
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          33   0.012
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    29   0.14 
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   7.2  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 32.7 bits (71), Expect = 0.012
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 503 RTLVAKPGLVHSRDSDGYTPLHRAAYSNHLDAIS-LLLSFGAKVSSKSELGWTPLHSA 673
           + L+     +H  D  G TPLHRA   N  D +  LLL  G ++   ++ G T L +A
Sbjct: 801 KALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLLQGGLRLDCTNDDGLTALQAA 858



 Score = 27.1 bits (57), Expect = 0.58
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +2

Query: 557 TPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSA 673
           T LH A   N    +  LL  GAK+      G TPLH A
Sbjct: 786 TGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRA 824


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 530 VHSRDSDGYTPLHRAAYSNHLDAISLLLSFGA 625
           V+S +SDG TPL  A  SN+     +LL  GA
Sbjct: 454 VNSLNSDGLTPLDVAVLSNNRSMTKMLLQQGA 485


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 19/81 (23%), Positives = 35/81 (43%)
 Frame = -1

Query: 521 VWQLEFSESV*LIVFCSP*YMINRICFRIFHQINILICVVPTRNKHTRRFWIFFQSLYFI 342
           VWQL  ++    I+F +   M   I F + H I  +   V   N   +R  I  + L  I
Sbjct: 518 VWQLASNK----IIFLNSYKMKLSIIFGVVHMIFGVCMSVVNHNFFKKRISIVLEFLPQI 573

Query: 341 TYFFEIFCFNIGIILIRHFNY 279
            +   +F + + ++ ++   Y
Sbjct: 574 IFLVLLFAYMVFMMFMKWIAY 594


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,589
Number of Sequences: 2352
Number of extensions: 12802
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)