Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0849
(808 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 163 5e-39
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 150 4e-35
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 144 2e-33
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 131 2e-29
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 129 7e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 127 4e-28
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 105 2e-21
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 103 7e-21
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 94 4e-18
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 86 9e-16
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 82 1e-14
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 81 4e-14
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 79 2e-13
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 74 4e-12
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 73 6e-12
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 73 9e-12
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 73 1e-11
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 72 1e-11
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 72 2e-11
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 72 2e-11
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 69 1e-10
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 68 3e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 67 4e-10
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 67 6e-10
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 66 1e-09
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 1e-09
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 66 1e-09
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 66 1e-09
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 65 2e-09
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 65 2e-09
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 64 5e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 62 2e-08
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 61 3e-08
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 60 9e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 57 5e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 6e-07
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 54 4e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 1e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 3e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 51 4e-05
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 50 5e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 5e-05
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 49 1e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 2e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 3e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 4e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 5e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.002
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 44 0.006
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.006
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.006
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.008
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 43 0.010
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.010
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.032
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.032
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 38 0.30
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.39
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.39
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.39
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.39
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.52
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.52
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.69
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 36 0.91
UniRef50_Q12FM3 Cluster: Phage integrase; n=2; Proteobacteria|Re... 36 1.2
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 1.2
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 1.2
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.6
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.8
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.8
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 35 2.8
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 34 3.7
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 3.7
UniRef50_Q1H0K6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.5
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 163 bits (396), Expect = 5e-39
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAI
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAI 151
Query: 439 RGAIILAKLSVLPVRRGYWGNKI 507
RGAIILAKLS++PVRRGYWGNKI
Sbjct: 152 RGAIILAKLSIVPVRRGYWGNKI 174
Score = 100 bits (239), Expect = 5e-20
Identities = 45/57 (78%), Positives = 47/57 (82%)
Frame = +3
Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
K HTVPC VTG+CGSV RLIPAP GT IVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 176 KPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 232
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK+S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 150 bits (364), Expect = 4e-35
Identities = 72/83 (86%), Positives = 75/83 (90%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAI
Sbjct: 32 EIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAI 91
Query: 439 RGAIILAKLSVLPVRRGYWGNKI 507
RGAIILAKLS++PV RGYWGNKI
Sbjct: 92 RGAIILAKLSIVPVCRGYWGNKI 114
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2
Query: 167 VPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
+PVTKLG L+ + KI LE IYLFSLPIK+S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
Score = 41.9 bits (94), Expect = 0.018
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 510 KXHTVPCXVTGKCGSVTXRLIPAP 581
K HTVPC VTG+C SV LIPAP
Sbjct: 116 KPHTVPCKVTGRCSSVLVHLIPAP 139
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 144 bits (349), Expect = 2e-33
Identities = 64/101 (63%), Positives = 83/101 (82%)
Frame = +1
Query: 205 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 384
K + E L + ++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 385 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 507
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTAL 147
Score = 86.2 bits (204), Expect = 9e-16
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +3
Query: 516 HTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
HTVP V+GKCGSVT RL+PAP G +V+APV K+ LQ+AG++DCYT +RGST T
Sbjct: 151 HTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKT 205
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/37 (67%), Positives = 33/37 (89%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIK+
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKE 64
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 131 bits (316), Expect = 2e-29
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 475 PVRRGYWGNKI 507
P+R+GYWGNKI
Sbjct: 108 PLRQGYWGNKI 118
Score = 87.4 bits (207), Expect = 4e-16
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +3
Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
K +TVPC VTG CGSV LIPAP GT +VSAPVPKKLL MAG+ DCYTSAR T +
Sbjct: 120 KPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTAS 176
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 129 bits (312), Expect = 7e-29
Identities = 59/96 (61%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Frame = +1
Query: 223 EHLLVF-FTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 399
EH+ +F + +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 400 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 507
LGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/55 (58%), Positives = 38/55 (69%)
Frame = +3
Query: 516 HTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
HT+P V GKCGSV RLIPAP G IV++ KK+L MAG+ D YT +RG T T
Sbjct: 168 HTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRT 222
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2
Query: 149 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
+D+ WVP TKLGRLV++GKI LE I+LFSLPIK+
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKE 80
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 127 bits (306), Expect = 4e-28
Identities = 58/86 (67%), Positives = 70/86 (81%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ F+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 430 TAIRGAIILAKLSVLPVRRGYWGNKI 507
AIR II+AKLSV+P+RRGYWG +
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWGTNL 148
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = +3
Query: 516 HTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILL 695
H++ TGKCGSVT RLIPAP G+ IV++P KKLLQ+AGV+D YT + G T T E L
Sbjct: 152 HSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTL 211
Query: 696 K 698
K
Sbjct: 212 K 212
Score = 53.2 bits (122), Expect = 7e-06
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +2
Query: 152 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
++K WVPVTKLGRLV+ GKI +E I+L SLP+K+
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKE 65
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 105 bits (251), Expect = 2e-21
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = +3
Query: 480 PKRLLG*QDRKXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTS 659
P+ G + RK HTVP VTG+CGSV RLIPAP GT VSAPVPKKLL MAG+ DCYTS
Sbjct: 106 PRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTS 165
Query: 660 ARGSTGTWEILLKPHTLPLPRHMPXSLLNCGR 755
ARG T TW L + + PR S L G+
Sbjct: 166 ARGHTATWGTLPRLLLMRSPRPTAISPLISGK 197
Score = 96.7 bits (230), Expect = 6e-19
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +1
Query: 346 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 507
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEI 114
Score = 33.5 bits (73), Expect = 6.4
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 152 DQKEWVPVTKLGRLVREGKI 211
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 103 bits (246), Expect = 7e-21
Identities = 47/79 (59%), Positives = 57/79 (72%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AI
Sbjct: 53 EIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAI 112
Query: 439 RGAIILAKLSVLPVRRGYW 495
RGAI AK ++ PVR G W
Sbjct: 113 RGAIARAKCAIRPVRLGLW 131
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +3
Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEI 689
K HTV C +GKCG+ ++IPAP GT I+S V KK+ ++AG++D YT + G+T T E
Sbjct: 137 KPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTEN 196
Query: 690 LLK 698
K
Sbjct: 197 FAK 199
Score = 38.7 bits (86), Expect = 0.17
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
++++ EW+P T +GRLV+ KI LE I+ FS I++
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIRE 51
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 93.9 bits (223), Expect = 4e-18
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 402
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 67 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK+S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 86.2 bits (204), Expect = 9e-16
Identities = 41/60 (68%), Positives = 43/60 (71%)
Frame = +3
Query: 501 QDRKXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
Q R VTG+CGSV RLIPAP GT IVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 115 QTRAGQRTRFKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 174
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 360
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK+S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 399
EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 20 EIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 80.6 bits (190), Expect = 4e-14
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = -2
Query: 504 LVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLF 325
LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L
Sbjct: 29 LVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLL 88
Query: 324 LYRHDLKNLIIQGRAEEEINDLESLIGK 241
L HDL++ ++Q A+EEI+DLE G+
Sbjct: 89 LDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 78.6 bits (185), Expect = 2e-13
Identities = 40/68 (58%), Positives = 45/68 (66%)
Frame = +3
Query: 477 SPKRLLG*QDRKXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYT 656
S ++ LG + K H V C VTG CGSV LIPA GT I SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 657 SARGSTGT 680
SARG T +
Sbjct: 61 SARGCTAS 68
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 74.1 bits (174), Expect = 4e-12
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = +3
Query: 495 G*QDRKXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARG 668
G + K HTV C VTG GSV+ LIPAP T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
Score = 73.3 bits (172), Expect = 6e-12
Identities = 44/82 (53%), Positives = 53/82 (64%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I
Sbjct: 80 EIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVANTI 130
Query: 439 RGAIILAKLSVLPVRRGYWGNK 504
+ IIL KL ++PV RGY G+K
Sbjct: 131 QRVIILTKLPIVPVWRGYCGSK 152
Score = 34.3 bits (75), Expect = 3.7
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 170 PVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
P +KLG LV++ +I L IYLFSLPIK++
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKET 79
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 73.3 bits (172), Expect = 6e-12
Identities = 36/64 (56%), Positives = 49/64 (76%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ ++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 93 KEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQ 151
Query: 430 TAIR 441
AI+
Sbjct: 152 GAIQ 155
Score = 55.2 bits (127), Expect = 2e-06
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Frame = +2
Query: 155 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD----SRSLISSSARP*MMRFLRSCLY 322
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIK+ L + P + ++
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 323 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSC--QFYQSEE-VT 493
+ A+V ++ + + L W +A++ + L +L C QF S++ +
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQTQFDSSQKRIL 175
Query: 494 GVTR*KATHRPLQXHRQVWFRNXPADSCX*WYXYCVCXSS*EASSDGWCTGLLH 655
G TH P+Q R+ S Y Y E ++GW LLH
Sbjct: 176 GKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 72.9 bits (171), Expect = 9e-12
Identities = 39/83 (46%), Positives = 58/83 (69%)
Frame = -2
Query: 498 TPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 319
TPVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 318 RHDLKNLIIQGRAEEEINDLESL 250
R D+ N I+Q ++ +NDLE L
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFL 193
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/97 (36%), Positives = 61/97 (62%)
Frame = +1
Query: 235 VFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 414
+FF N + +++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNK--LVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 415 SKEVATAIRGAIILAKLSVLPVRRGYWGNKIESXTPS 525
S + I+ A+ AKL++ +RRGYW +IE P+
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYW--EIEEGKPN 184
Score = 50.0 bits (114), Expect = 7e-05
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +3
Query: 501 QDRKXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGST 674
++ K +T+ +GK GSV + PAP GT IV++ +L+++G++DC+T + G T
Sbjct: 179 EEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRT 236
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AI
Sbjct: 48 EIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAI 106
Query: 439 RGAIILAKLSVLPVRRG 489
R AI AKLS++ VR G
Sbjct: 107 RKAIAHAKLSLIKVRVG 123
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +3
Query: 516 HTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
H++P G CGSV L+PAP G +V+ V K +L +AGV+D +T G T T
Sbjct: 135 HSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRT 189
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +3
Query: 534 VTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
VTG+CGSV RL AP GT IVSAPVPKKLL MA + DCYT ARG T T
Sbjct: 126 VTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTAT 173
Score = 60.5 bits (140), Expect = 5e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 360
EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 92 EIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 56.4 bits (130), Expect = 8e-07
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
K + KEW+P TKLG LV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA+ I
Sbjct: 24 EIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTI 82
Query: 439 RGAIILAKLSVLPVRRG 489
R AI AKL+++PV RG
Sbjct: 83 RKAIDKAKLNMIPVMRG 99
Score = 46.4 bits (105), Expect = 8e-04
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +3
Query: 519 TVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
+VP +TG+ GS L+PAP+G +V + +++L +AGV D ++ + G T T
Sbjct: 112 SVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRT 165
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 69.3 bits (162), Expect = 1e-10
Identities = 35/55 (63%), Positives = 39/55 (70%)
Frame = +3
Query: 516 HTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
H VPC VTG+CGS+ LIPAP GT VSAPVP KLL MAG+ D +SA G T T
Sbjct: 154 HMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTAT 206
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +1
Query: 316 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 495
P+ KQT Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATG 147
Query: 496 GNKIE 510
G ++E
Sbjct: 148 GKRLE 152
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2
Query: 155 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKDSRSLISSSARP 289
+ +W+P+TKLG LV+E KI LE IY FSL ++ RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ FE+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 430 TAIRGAIILAKLSV 471
A+ +L+ + V
Sbjct: 210 IAVCRTNVLSIILV 223
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI
Sbjct: 45 EIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAI 103
Query: 439 RGAIILAKLSVLPVRRG 489
+ AI AK++++PVRRG
Sbjct: 104 QKAIRDAKMNIIPVRRG 120
Score = 56.4 bits (130), Expect = 8e-07
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +3
Query: 516 HTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWE 686
H++P V GK GSV L+PAP GT +V V K LL AG++D +++ +G T T E
Sbjct: 132 HSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTE 188
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 158 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
+EW P T +G LV+EGKI ++ ++ +LPI +
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITE 43
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 66.9 bits (156), Expect = 6e-10
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ FEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 430 TAIRGAIILAKL-SVLPVRRGYWGNKIESXT 519
TA+ + + L S LP R Y GN I T
Sbjct: 79 TAVGLSSWSSFLSSCLP--RDYCGNNIRKPT 107
Score = 39.1 bits (87), Expect = 0.13
Identities = 30/72 (41%), Positives = 37/72 (51%)
Frame = +3
Query: 465 VSSTSPKRLLG*QDRKXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQ 644
+SS P+ G RK T PC TG S++ L P IVS VP+KL+ A +
Sbjct: 90 LSSCLPRDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLA-FIVSVLVPRKLMLRASID 144
Query: 645 DCYTSARGSTGT 680
CYTSAR T T
Sbjct: 145 SCYTSARSYTVT 156
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/54 (61%), Positives = 37/54 (68%)
Frame = +3
Query: 519 TVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
TV C VTG+C SV LIP I+SAPVPKKLL +A + DCYTSARG T T
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTAT 213
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = +1
Query: 247 NQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 426
N++ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 427 ATAI 438
ATAI
Sbjct: 143 ATAI 146
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 322 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 465
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
Score = 57.2 bits (132), Expect = 5e-07
Identities = 31/56 (55%), Positives = 33/56 (58%)
Frame = +3
Query: 534 VTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILLKP 701
VT GSV LIPAP GT IVSAPV K L AG+ +CY SAR T T KP
Sbjct: 63 VTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYNFSKP 118
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 65.7 bits (153), Expect = 1e-09
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = +1
Query: 268 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 447
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 448 IILAKLSVLPVRRGYWGNKI 507
IIL + S+ G+ GNKI
Sbjct: 55 IILDRSSIAIAWGGWSGNKI 74
Score = 59.7 bits (138), Expect = 9e-08
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = +3
Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEI 689
K HTV C VT SV I AP GT I+SAPVPKKLL+MA + D + ARG T +
Sbjct: 76 KPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAILDN 135
Query: 690 LLK 698
++K
Sbjct: 136 VIK 138
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/80 (36%), Positives = 52/80 (65%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ ++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A
Sbjct: 34 KEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAA 92
Query: 430 TAIRGAIILAKLSVLPVRRG 489
AI+ AI AKL+++ ++RG
Sbjct: 93 PAIKKAIDNAKLNIIEIKRG 112
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = +3
Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
K HT+P V GK GSV+ L PAP G + V K +L+MAG+ D + A G T T
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKT 178
Score = 33.5 bits (73), Expect = 6.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 158 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
+EW P T+LGRLV G+I + LP+K+
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKE 35
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +3
Query: 573 PAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
PAP GT IVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 36
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Frame = +1
Query: 259 EIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 426
EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV
Sbjct: 48 EIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEV 106
Query: 427 ATAIRGAIILAKLSVLPVRRG 489
AIR AI AKL+++ ++RG
Sbjct: 107 GIAIRKAINYAKLNIIEIKRG 127
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +3
Query: 507 RKXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
R+ H+VP V GK GSV RLIP P G +V V KK+L++AGVQD ++ G T T
Sbjct: 136 RRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRT 193
Score = 33.5 bits (73), Expect = 6.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 161 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
EW P TKLG +V+EG+I + I+ IK+
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKE 46
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/77 (42%), Positives = 50/77 (64%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI
Sbjct: 90 EIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAI 148
Query: 439 RGAIILAKLSVLPVRRG 489
+ AI +AKL+++ V RG
Sbjct: 149 QKAIDVAKLNIIEVDRG 165
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +3
Query: 540 GKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILLK 698
GK GSVT + PAP G + +A + +L++AGV+D +T++ G+T T L K
Sbjct: 185 GKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVNLAK 237
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +1
Query: 283 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 462
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 463 LSVLPVRRG 489
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +3
Query: 504 DRKXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
D+K H+VP V GK GSVT +IPAP G +V+ K+LL++AG++D +T+A+GST T
Sbjct: 162 DQK-HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPT 219
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI
Sbjct: 39 EVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAI 97
Query: 439 RGAIILAKLSVLPVRRG 489
+ AI +AKL+++ V RG
Sbjct: 98 QKAIDIAKLNIIDVSRG 114
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +3
Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
+ HTV GK GSV L PAP G + +K+L++AG++D +T + G+T T
Sbjct: 124 RPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRT 180
Score = 33.9 bits (74), Expect = 4.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 164 WVPVTKLGRLVREGKIDKLESIYLFSLPIKDS 259
W P T+LG+ V EG+ID ++ LP+K+S
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKES 38
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 59.7 bits (138), Expect = 9e-08
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = +3
Query: 504 DRKXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
D+K H+VP V GK GSV ++PAP G +V+ ++LL++AG++D YT+A+GST T
Sbjct: 143 DQK-HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 283 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 462
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 463 LSVLPVRRG 489
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 253
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 57.2 bits (132), Expect = 5e-07
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 429
+ FE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 430 TAIRGAIIL 456
A+ IIL
Sbjct: 76 IAVCRTIIL 84
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +1
Query: 280 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 459
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 460 KLSVL--PVRRGY 492
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 54.0 bits (124), Expect = 4e-06
Identities = 37/83 (44%), Positives = 45/83 (54%)
Frame = +1
Query: 259 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 438
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 439 RGAIILAKLSVLPVRRGYWGNKI 507
+ AI L + + GY GNKI
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNKI 126
Score = 38.3 bits (85), Expect = 0.23
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 516 HTVPCXVTG-KCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGV 641
HT+PC VT + V L AP GT VSA VPKKL +A +
Sbjct: 130 HTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 468
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 469 VLPV 480
++ V
Sbjct: 72 LISV 75
Score = 38.3 bits (85), Expect = 0.23
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 519 TVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGS 671
T+P + G+ GS + PA GT ++S + +L++AGV D T + GS
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 286 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 465
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 466 SVLPVRR 486
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 43.2 bits (97), Expect = 0.008
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 534 VTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEIL 692
V G+ G+ L+PAP GT I++ + ++++AG D YT +RG+ ++
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPMNVI 176
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +1
Query: 268 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 447
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 448 IILAKLSVLPV 480
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 322 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 489
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +3
Query: 516 HTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
H++P V GK GSV L PAP G IV+ KK+ ++AG++D + + G T T
Sbjct: 139 HSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKT 193
Score = 37.1 bits (82), Expect = 0.52
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 158 KEWVPVTKLGRLVREGKIDKLESI 229
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 50.4 bits (115), Expect = 5e-05
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = -1
Query: 694 SKISQVPVEPRADV*QSCTPAI*RSFLGTGADTIXVPLGAGISRXVTEPHLPVTLQG 524
+K +V V+P A V QS P+ FLGT A+ + VP+GAG+ TEP P+TL G
Sbjct: 11 AKSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG 67
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 283 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 462
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 463 LSVLPV 480
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 250 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 402
+ ++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 63 KEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 39.1 bits (87), Expect = 0.13
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 170 PVTKLGRLVREGKIDKLESIYLFSLPIKD 256
PVTKLGRLV++GK+ ++ I+ F + IK+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKE 64
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 468
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 469 VLPVR 483
+ V+
Sbjct: 138 MYKVK 142
Score = 33.5 bits (73), Expect = 6.4
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARG 668
K T+ V GK G+ + PAP GT +++ K +L++ G +D Y+ G
Sbjct: 145 KNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLG 197
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 475 PV 480
+
Sbjct: 71 KI 72
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 475 PV 480
V
Sbjct: 77 EV 78
Score = 37.1 bits (82), Expect = 0.52
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +3
Query: 519 TVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILL 695
T+P V G+ + L PA GT I++ + ++++AG+Q+ T + GST + L
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPLNLAL 142
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +1
Query: 274 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 453
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 454 LAKLSVLPV 480
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 34.3 bits (75), Expect = 3.7
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 519 TVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARG 668
TVP V G G+ + PA GT +++ + ++++AG+ D Y + G
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 475 --PVRRG 489
PV G
Sbjct: 79 TVPVENG 85
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 519 TVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGS 671
T+P + G+ + L PA GT +++ VP+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 475 PV 480
V
Sbjct: 209 QV 210
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 447
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 475 PV 480
V
Sbjct: 246 TV 247
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 280 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 459
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 460 KLSVL--PVRRG 489
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +1
Query: 280 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 459
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 460 KLSVLPVRR 486
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 468
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 469 VLPVRRG 489
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 43.6 bits (98), Expect = 0.006
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 164 WVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
W PVTKLGRLV++GK+ ++ I+ F + IK+
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKE 65
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 292 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 471
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 472 LPV 480
+ +
Sbjct: 91 VKI 93
Score = 43.2 bits (97), Expect = 0.008
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +3
Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEI 689
K HT+P V GK S L P+ +GT I++ + +++ AG+QD T + GS+ I
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSSNPVNI 155
Query: 690 L 692
+
Sbjct: 156 V 156
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 475 PV 480
V
Sbjct: 128 RV 129
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 468
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 469 VLPV 480
V+ V
Sbjct: 88 VIRV 91
Score = 37.5 bits (83), Expect = 0.39
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 519 TVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGST 674
TVP V G G+ ++PA GT +V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +3
Query: 585 GTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILLK 698
G+ +V+ VPKK+L+ AG++D +TS+RGST T +K
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVK 39
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 475 PV 480
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.032
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 295 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 474
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 475 PV 480
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.032
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 462
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 37.9 bits (84), Expect = 0.30
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = -2
Query: 255 SLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 151
SL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 19 SLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.39
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 319 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 486
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.39
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 441
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.39
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 468
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 469 VLPVRR 486
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.5 bits (83), Expect = 0.39
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 154 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNQRFEIIDFFLGPS--LNDEVLKIMPVQK 327
P+ G+ + T S KN + ++ TN + + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 328 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 480
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV 152
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.52
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 450 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 352
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.52
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 441
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.69
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 289 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 468
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 469 VLPV 480
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 36.3 bits (80), Expect = 0.91
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 534 VTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARG 668
V G+ G+ L PAP GT I++ + ++++AG D YT G
Sbjct: 140 VIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_Q12FM3 Cluster: Phage integrase; n=2; Proteobacteria|Rep:
Phage integrase - Polaromonas sp. (strain JS666 / ATCC
BAA-500)
Length = 311
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -3
Query: 143 RAHDHGRYXDRVHEDRHGLYLHRVIRIRRENRHVHRL 33
R HD GRY R+H+ RH + R++R RE V RL
Sbjct: 230 RRHDGGRYQPRLHDLRHTAAVTRLVRWYREGVDVQRL 266
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 292 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 441
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 519 TVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGST 674
T+P V K G L PA +GT +++ + +L++AGV+D + G++
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 301 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 480
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 319 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 486
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 2.1
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 286 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 465
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 466 SVLPVRR 486
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.8
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 277 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 456
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 457 AKLSVL 474
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.8
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 274 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 438
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 34.7 bits (76), Expect = 2.8
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 519 TVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGS 671
++P V G+ G+ LIPA +GT I++ + + + G+ D T + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = -2
Query: 360 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEINDLESL 250
LE+CAL TC+ +Y HD+ ++ + +A+E+++D L
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSDAHGL 1005
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 3.7
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 286 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 465
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 466 SVLPVRR 486
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q1H0K6 Cluster: Putative uncharacterized protein; n=1;
Methylobacillus flagellatus KT|Rep: Putative
uncharacterized protein - Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875)
Length = 237
Score = 33.1 bits (72), Expect = 8.5
Identities = 25/67 (37%), Positives = 32/67 (47%)
Frame = +3
Query: 525 PCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGTWEILLKPH 704
P T + S T IP +GT V++P P +L D Y SA + G EI KP
Sbjct: 59 PSATTPRHDSSTMATIPGHTGTSAVTSPPPPQL-------DAYWSAFLNAGFTEI--KPT 109
Query: 705 TLPLPRH 725
+ PLP H
Sbjct: 110 SEPLPAH 116
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 8.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 301 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 447
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,526,851
Number of Sequences: 1657284
Number of extensions: 15099551
Number of successful extensions: 37647
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 36123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37617
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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