Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0849
         (808 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml prot...   170   2e-42
U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal prot...   170   2e-42
U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal prot...   170   2e-42
AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p pro...   170   2e-42
AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA...   170   2e-42

>X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml protein
           S2 protein.
          Length = 267

 Score =  170 bits (414), Expect = 2e-42
 Identities = 84/101 (83%), Positives = 87/101 (86%)
 Frame = +1

Query: 205 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 384
           K +   E  L     + FEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57  KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116

Query: 385 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 507
           NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKI
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKI 157



 Score =  105 bits (253), Expect = 5e-23
 Identities = 47/57 (82%), Positives = 51/57 (89%)
 Frame = +3

Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
           K HTVPC VTGKCGSV+ RLIPAP GT IVSAPVP+KLL MAG++DCYTSARGSTGT
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGT 215



 Score = 69.3 bits (162), Expect = 6e-12
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +2

Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIK+
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73


>U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  170 bits (414), Expect = 2e-42
 Identities = 84/101 (83%), Positives = 87/101 (86%)
 Frame = +1

Query: 205 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 384
           K +   E  L     + FEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57  KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116

Query: 385 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 507
           NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKI
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKI 157



 Score =  107 bits (256), Expect = 2e-23
 Identities = 48/57 (84%), Positives = 51/57 (89%)
 Frame = +3

Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
           K HTVPC VTGKCGSV+ RLIPAP GT IVSAPVPKKLL MAG++DCYTSARGSTGT
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215



 Score = 69.3 bits (162), Expect = 6e-12
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +2

Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIK+
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73


>U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  170 bits (414), Expect = 2e-42
 Identities = 84/101 (83%), Positives = 87/101 (86%)
 Frame = +1

Query: 205 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 384
           K +   E  L     + FEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57  KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116

Query: 385 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 507
           NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKI
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKI 157



 Score =  107 bits (256), Expect = 2e-23
 Identities = 48/57 (84%), Positives = 51/57 (89%)
 Frame = +3

Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
           K HTVPC VTGKCGSV+ RLIPAP GT IVSAPVPKKLL MAG++DCYTSARGSTGT
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215



 Score = 69.3 bits (162), Expect = 6e-12
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +2

Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIK+
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73


>AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p
           protein.
          Length = 267

 Score =  170 bits (414), Expect = 2e-42
 Identities = 84/101 (83%), Positives = 87/101 (86%)
 Frame = +1

Query: 205 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 384
           K +   E  L     + FEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57  KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116

Query: 385 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 507
           NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKI
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKI 157



 Score =  107 bits (256), Expect = 2e-23
 Identities = 48/57 (84%), Positives = 51/57 (89%)
 Frame = +3

Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
           K HTVPC VTGKCGSV+ RLIPAP GT IVSAPVPKKLL MAG++DCYTSARGSTGT
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215



 Score = 69.3 bits (162), Expect = 6e-12
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +2

Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIK+
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73


>AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA
           protein.
          Length = 267

 Score =  170 bits (414), Expect = 2e-42
 Identities = 84/101 (83%), Positives = 87/101 (86%)
 Frame = +1

Query: 205 KNRQTREHLLVFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 384
           K +   E  L     + FEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57  KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116

Query: 385 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 507
           NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKI
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKI 157



 Score =  107 bits (256), Expect = 2e-23
 Identities = 48/57 (84%), Positives = 51/57 (89%)
 Frame = +3

Query: 510 KXHTVPCXVTGKCGSVTXRLIPAPSGTXIVSAPVPKKLLQMAGVQDCYTSARGSTGT 680
           K HTVPC VTGKCGSV+ RLIPAP GT IVSAPVPKKLL MAG++DCYTSARGSTGT
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215



 Score = 69.3 bits (162), Expect = 6e-12
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +2

Query: 146 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 256
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIK+
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,474,717
Number of Sequences: 53049
Number of extensions: 738752
Number of successful extensions: 1747
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)