BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0848 (817 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_0288 + 24164671-24165549,24166113-24166496 31 1.1 07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171,744... 30 1.9 04_03_0579 + 17481012-17481219,17481776-17481849,17482207-174822... 30 1.9 >04_04_0288 + 24164671-24165549,24166113-24166496 Length = 420 Score = 31.1 bits (67), Expect = 1.1 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 352 PRLIVGKTSIQLECVTSKTDNLISAIVTVQKLATSSVI 239 PR+ G TS+ LECVT + I +KL S++ Sbjct: 154 PRVFAGLTSLHLECVTVQGPRFSDVITACEKLIDLSLV 191 >07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171, 7440268-7440405,7440619-7440874,7440963-7441318, 7441421-7441709 Length = 1004 Score = 30.3 bits (65), Expect = 1.9 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Frame = +1 Query: 496 PSDVAENGGADAKLKLDIRLALQAVVAGKLCL-DITH--AVSCLPAGWLWGEKIGSTKVA 666 P V A ++L LDI + + VAG LCL D T A+ L W E + TK Sbjct: 158 PPMVRRGFAAASRLSLDINVLMLIAVAGALCLGDYTEAGAIVFLFTTAEWLETLACTK-- 215 Query: 667 AIATTSSVIGI 699 A A SS++G+ Sbjct: 216 ASAGMSSLMGM 226 >04_03_0579 + 17481012-17481219,17481776-17481849,17482207-17482211, 17482523-17482607,17484144-17484231,17484307-17484398, 17484903-17485055 Length = 234 Score = 30.3 bits (65), Expect = 1.9 Identities = 15/36 (41%), Positives = 23/36 (63%) Frame = -1 Query: 595 CPGTASLLPQPVRLVGCLV*VSHQLHRFQQRLKAIP 488 C G A ++ + VR + LV ++H LH Q+L+AIP Sbjct: 84 CKGLACVISEQVRYLA-LVRIAHILHVCHQKLRAIP 118 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,612,571 Number of Sequences: 37544 Number of extensions: 388427 Number of successful extensions: 885 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 868 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 885 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2232933960 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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