BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0846 (673 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF022985-11|AAB69967.2| 650|Caenorhabditis elegans Hypothetical... 29 3.0 Z82288-7|CAB05326.1| 390|Caenorhabditis elegans Hypothetical pr... 29 4.0 AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 28 5.3 >AF022985-11|AAB69967.2| 650|Caenorhabditis elegans Hypothetical protein T15B7.14 protein. Length = 650 Score = 29.1 bits (62), Expect = 3.0 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +3 Query: 123 IWDLFSWNYICVLAINASANLIVNVLRNLGL 215 IW L W++I +L +AS +L +NVLR+ L Sbjct: 392 IWALI-WSFIVILFSSASHSLFLNVLRDTDL 421 >Z82288-7|CAB05326.1| 390|Caenorhabditis elegans Hypothetical protein ZK896.9 protein. Length = 390 Score = 28.7 bits (61), Expect = 4.0 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 292 VKQMFYVTSFLIDTNYILRLKY-MCRHKPKFLKTLTIRFALAF 167 +K V + + + +L ++Y M + +PKFLKT+T+ F F Sbjct: 9 IKYSSLVVLVVQNCSLVLFMRYAMTKDRPKFLKTITVLFGEIF 51 >AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical protein C08G9.2 protein. Length = 2224 Score = 28.3 bits (60), Expect = 5.3 Identities = 11/30 (36%), Positives = 13/30 (43%) Frame = +1 Query: 10 IXCRAKYDVVSQRTCKTVCKTTCQFRVWSL 99 + CR YD C C T+CQF L Sbjct: 1343 VGCRHHYDCTHSSCCYNGCGTSCQFETRQL 1372 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,480,551 Number of Sequences: 27780 Number of extensions: 285191 Number of successful extensions: 569 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 554 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 569 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1518563232 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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