Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0846
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical...    29   3.0  
Z82288-7|CAB05326.1|  390|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    28   5.3  

>AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical
           protein T15B7.14 protein.
          Length = 650

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 123 IWDLFSWNYICVLAINASANLIVNVLRNLGL 215
           IW L  W++I +L  +AS +L +NVLR+  L
Sbjct: 392 IWALI-WSFIVILFSSASHSLFLNVLRDTDL 421


>Z82288-7|CAB05326.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK896.9 protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -1

Query: 292 VKQMFYVTSFLIDTNYILRLKY-MCRHKPKFLKTLTIRFALAF 167
           +K    V   + + + +L ++Y M + +PKFLKT+T+ F   F
Sbjct: 9   IKYSSLVVLVVQNCSLVLFMRYAMTKDRPKFLKTITVLFGEIF 51


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 10   IXCRAKYDVVSQRTCKTVCKTTCQFRVWSL 99
            + CR  YD      C   C T+CQF    L
Sbjct: 1343 VGCRHHYDCTHSSCCYNGCGTSCQFETRQL 1372


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,480,551
Number of Sequences: 27780
Number of extensions: 285191
Number of successful extensions: 569
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)