Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0846
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   1.5  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   2.6  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   8.1  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 149 IIPAK*IPNLAWNIRRCRLHTRNWQVVLHTVLQ 51
           II  K I NLA++ R  R+H   + + L   +Q
Sbjct: 355 IISVKIIQNLAYSGRMNRIHKNEYMLALSNRMQ 387


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 595 LCIIGTTYVSSPLFLLSTVDWF 660
           +C + T Y   PL+ LST+ +F
Sbjct: 200 MCAMLTIYADFPLYELSTIIFF 221


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 112 FHARFGIYLAGIIFVC 159
           F   FG+YL+  + VC
Sbjct: 116 FFRMFGLYLSSFVLVC 131


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 272 DVKHLFDYPLYKSLK 316
           +V+++F +PL KSLK
Sbjct: 499 EVEYVFGHPLNKSLK 513


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +3

Query: 135 FSWNYICVLAINASANLIVNV 197
           F W  IC++ + A  ++I+ +
Sbjct: 397 FGWQMICLIVVIALVSIIMYI 417


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,865
Number of Sequences: 438
Number of extensions: 3816
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)