Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0844
         (421 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0544 - 18655186-18655567,18656835-18657151                       50   1e-06
02_05_0089 - 25715637-25716333,25716481-25717238                       48   4e-06
02_05_1047 + 33745656-33745964                                         46   9e-06
10_08_0543 - 18649894-18650233,18651446-18651981                       46   1e-05
03_02_0826 + 11569961-11570301,11572220-11572454                       42   2e-04
03_02_0079 + 5485090-5485238,5486066-5486137,5486764-5486840,548...    30   0.66 
01_06_0011 - 25559099-25559238,25559781-25559814,25560172-255603...    28   3.5  
08_01_0218 + 1743566-1745537,1746834-1747696,1748329-1748991           27   4.6  
09_02_0450 + 9468495-9468528,9468947-9469062,9470031-9470858,947...    27   6.1  
07_03_0382 + 17470508-17470807,17471449-17474517                       27   8.1  

>10_08_0544 - 18655186-18655567,18656835-18657151
          Length = 232

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 21/39 (53%), Positives = 26/39 (66%)
 Frame = +3

Query: 303 LRQYXGTQEGGRXXMAVNGWIFDVTRGNRFYGPGGPYAV 419
           LRQY G+       MA+ G I+DVT+   FYGPGGPYA+
Sbjct: 79  LRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYAL 117


>02_05_0089 - 25715637-25716333,25716481-25717238
          Length = 484

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 20/39 (51%), Positives = 25/39 (64%)
 Frame = +3

Query: 303 LRQYXGTQEGGRXXMAVNGWIFDVTRGNRFYGPGGPYAV 419
           LR Y G+       MA+ G I+DVT+   FYGPGGPYA+
Sbjct: 226 LRVYDGSDPNKPLLMAIKGQIYDVTQSRMFYGPGGPYAL 264


>02_05_1047 + 33745656-33745964
          Length = 102

 Score = 46.4 bits (105), Expect = 9e-06
 Identities = 20/45 (44%), Positives = 27/45 (60%)
 Frame = +3

Query: 285 DMXAVXLRQYXGTQEGGRXXMAVNGWIFDVTRGNRFYGPGGPYAV 419
           ++ A  LR Y G+       ++V G ++DVT G  FYGPGG YAV
Sbjct: 4   ELTAAQLRAYDGSDPSKPIYVSVRGKVYDVTSGRGFYGPGGAYAV 48


>10_08_0543 - 18649894-18650233,18651446-18651981
          Length = 291

 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = +3

Query: 285 DMXAVXLRQYXGTQEGGRXXMAVNGWIFDVTRGNRFYGPGGPYAV 419
           ++ A  L QY G+       MA+ G I+DV++   FYGPGGPYA+
Sbjct: 146 EITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYAL 190


>03_02_0826 + 11569961-11570301,11572220-11572454
          Length = 191

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +3

Query: 303 LRQYXGTQEGGRXXMAVNGWIFDVTRGNRFYGPGGPYAV 419
           L  Y G        +A+ G ++DVTRG  FYGP GPY++
Sbjct: 87  LAAYDGKDPAKPILIAIRGQVYDVTRGRLFYGPQGPYSL 125


>03_02_0079 +
           5485090-5485238,5486066-5486137,5486764-5486840,
           5486946-5486989,5487583-5487639,5487640-5487686,
           5488010-5488184,5489501-5489662,5489845-5489883
          Length = 273

 Score = 30.3 bits (65), Expect = 0.66
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 363 IFDVTRGNRFYGPGGPY 413
           +FDVT+G   YGPGG Y
Sbjct: 52  VFDVTKGKSNYGPGGGY 68


>01_06_0011 -
           25559099-25559238,25559781-25559814,25560172-25560333,
           25560335-25560454
          Length = 151

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 335 QXVDGCEWVDIRCD 376
           Q VD C W D+RCD
Sbjct: 129 QDVDPCNWKDVRCD 142


>08_01_0218 + 1743566-1745537,1746834-1747696,1748329-1748991
          Length = 1165

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 71  FLPRIKWIHHQRLKMCKPNTVAF 139
           +L  ++W      + CKPNT+AF
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAF 427


>09_02_0450 +
           9468495-9468528,9468947-9469062,9470031-9470858,
           9470955-9471107,9471194-9471604
          Length = 513

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 125 LACTFSTSGGESILF*VEKRLCRHIKFLFL 36
           L C FSTS     L   + RLCRHIK++ L
Sbjct: 214 LGCVFSTSFALEWL---KLRLCRHIKYMKL 240


>07_03_0382 + 17470508-17470807,17471449-17474517
          Length = 1122

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 261 KKLPKLRXDMXAVXLRQYXGTQEGGRXXMAVNGWIFDVTRGN 386
           KK+P     + AV LR+   TQE  +      GW FD  RG+
Sbjct: 359 KKIPMAVKIIGAV-LRRKEQTQESWQRVYEFEGWSFDDLRGD 399


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,732,562
Number of Sequences: 37544
Number of extensions: 177961
Number of successful extensions: 333
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)