BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0844 (421 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g24940.1 68415.m02982 cytochrome b5 domain-containing protein... 46 1e-05 At5g52240.1 68418.m06484 cytochrome b5 domain-containing protein... 45 2e-05 At3g48890.1 68416.m05341 cytochrome b5 domain-containing protein... 44 3e-05 At4g14965.1 68417.m02300 cytochrome b5 domain-containing protein... 35 0.026 >At2g24940.1 68415.m02982 cytochrome b5 domain-containing protein similar to SP|P70580 Membrane associated progesterone receptor component 1 {Rattus norvegicus}; contains Pfam profile PF00173: Heme/Steroid binding domain Length = 100 Score = 45.6 bits (103), Expect = 1e-05 Identities = 20/45 (44%), Positives = 26/45 (57%) Frame = +3 Query: 285 DMXAVXLRQYXGTQEGGRXXMAVNGWIFDVTRGNRFYGPGGPYAV 419 + A L QY GT E +A+ G +FDVT G FYG GG Y++ Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSM 46 >At5g52240.1 68418.m06484 cytochrome b5 domain-containing protein similar to SP|P70580 Membrane associated progesterone receptor component 1 {Rattus norvegicus}; contains Pfam profile PF00173: Heme/Steroid binding domain Length = 220 Score = 45.2 bits (102), Expect = 2e-05 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = +3 Query: 303 LRQYXGTQEGGRXXMAVNGWIFDVTRGNRFYGPGGPYAV 419 L+QY G+ MA+ I+DVT+ FYGPGGPYA+ Sbjct: 80 LKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYAL 118 >At3g48890.1 68416.m05341 cytochrome b5 domain-containing protein similar to SP|O00264 Membrane associated progesterone receptor component (mPR) {Homo sapiens}; contains Pfam profile PF00173: Heme/Steroid binding domain Length = 233 Score = 44.4 bits (100), Expect = 3e-05 Identities = 18/39 (46%), Positives = 25/39 (64%) Frame = +3 Query: 303 LRQYXGTQEGGRXXMAVNGWIFDVTRGNRFYGPGGPYAV 419 L+ Y G+ MA+ G I+DV++ FYGPGGPYA+ Sbjct: 76 LKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYAL 114 >At4g14965.1 68417.m02300 cytochrome b5 domain-containing protein similar to SP|O15173 Membrane associated progesterone receptor component 2 (Steroid receptor protein DG6) {Homo sapiens}; contains Pfam profile PF00173: Heme/Steroid binding domain Length = 245 Score = 34.7 bits (76), Expect = 0.026 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +3 Query: 294 AVXLRQYXGTQEGGRXXMAVNGWIFDVTRGNRFYGPGGPY 413 A L Y GT E + + G +FDVT+G YG GG Y Sbjct: 44 AEELALYNGTDETLPILLGILGSVFDVTKGKFHYGSGGGY 83 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,687,612 Number of Sequences: 28952 Number of extensions: 149707 Number of successful extensions: 311 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 311 length of database: 12,070,560 effective HSP length: 74 effective length of database: 9,928,112 effective search space used: 645327280 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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