Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0843
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   0.75 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   2.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   2.3  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   3.0  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   3.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   4.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    20   7.0  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 0.75
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 115 NLIIFKNVYPRLVXWSVGISWSME 186
           NLI+ +N Y  ++ WS    +S E
Sbjct: 170 NLILKENTYDAVIKWSPNEDYSCE 193


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 194 GKLL-FLGLDNAGKTTLXHML 253
           G+LL  LG   AGKTTL + L
Sbjct: 104 GELLAILGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 194 GKLL-FLGLDNAGKTTLXHML 253
           G+LL  LG   AGKTTL + L
Sbjct: 104 GELLAILGSSGAGKTTLLNTL 124


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 353 CPPRSNVVKRILPIXXSSD 297
           C P ++ +KR+LP    SD
Sbjct: 51  CTPDADELKRVLPDALKSD 69


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 353 CPPRSNVVKRILP 315
           CPP+   +KR+LP
Sbjct: 53  CPPQGVDLKRVLP 65


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
          protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 57 VICYVVKWII 28
          VICYV  W I
Sbjct: 26 VICYVASWAI 35


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 279 YMLSKSIIFNICXSVVF 229
           Y LSK  IFN C    F
Sbjct: 97  YELSKQEIFNCCSKKSF 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,317
Number of Sequences: 336
Number of extensions: 1213
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)