Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0843
(370 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 73 5e-14
01_01_1068 - 8413269-8413589,8414011-8414262,8417472-8417603,841... 73 5e-14
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 72 1e-13
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648... 65 1e-11
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 33 0.053
12_01_0028 + 242016-242467,242547-242918,243027-243182,245007-24... 33 0.093
11_01_0029 + 226459-226973,227053-227424,227533-227688,229513-22... 33 0.093
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 32 0.16
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 32 0.16
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 32 0.16
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 32 0.16
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 32 0.16
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 32 0.16
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 30 0.49
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 29 0.86
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 29 1.1
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 29 1.5
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 28 2.6
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 27 3.5
03_05_1048 - 29950860-29951396,29951810-29952676 27 4.6
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 27 4.6
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 27 6.1
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 73.3 bits (172), Expect = 5e-14
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +2
Query: 134 MFILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLK 256
MF++DWF GVL LGLW+K K+LFLGLDNAGKTTL HMLK
Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLK 41
Score = 61.3 bits (142), Expect = 2e-10
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 LVXWSVGISWSM---EKVGQALVSGX*QCREDNTXTYVEDDRLAQHVPTLXPTSEXLXIG 318
LV W G+ S+ +K + L G + ++D+RL QH PT PTSE L IG
Sbjct: 3 LVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIG 62
Query: 319 SMRFTTFDLGGHQQARR 369
++F FDLGGHQ ARR
Sbjct: 63 KIKFKAFDLGGHQIARR 79
>01_01_1068 -
8413269-8413589,8414011-8414262,8417472-8417603,
8417684-8417812
Length = 277
Score = 73.3 bits (172), Expect = 5e-14
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +2
Query: 134 MFILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLK 256
MF++DWF GVL LGLW+K K+LFLGLDNAGKTTL HMLK
Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLK 41
Score = 61.3 bits (142), Expect = 2e-10
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 LVXWSVGISWSM---EKVGQALVSGX*QCREDNTXTYVEDDRLAQHVPTLXPTSEXLXIG 318
LV W G+ S+ +K + L G + ++D+RL QH PT PTSE L IG
Sbjct: 3 LVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIG 62
Query: 319 SMRFTTFDLGGHQQARR 369
++F FDLGGHQ ARR
Sbjct: 63 KIKFKAFDLGGHQIARR 79
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +2
Query: 134 MFILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLK 256
MF+ DWF GVL LGLW+K K+LFLGLDNAGKTTL HMLK
Sbjct: 1 MFLWDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLK 41
Score = 58.4 bits (135), Expect = 2e-09
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 157 WSVGISWSM---EKVGQALVSGX*QCREDNTXTYVEDDRLAQHVPTLXPTSEXLXIGSMR 327
W G+ S+ +K + L G + ++D+RL QH PT PTSE L IG ++
Sbjct: 6 WFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIK 65
Query: 328 FTTFDLGGHQQARR 369
F FDLGGHQ ARR
Sbjct: 66 FKAFDLGGHQIARR 79
>06_01_0853 +
6486027-6486158,6486561-6486692,6486974-6486978,
6487948-6488017,6489456-6489776
Length = 219
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +2
Query: 137 FILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLKMIDL 268
F+LDWF VL +GLW+K K+LFLGLDNAGKTTL +ML +L
Sbjct: 3 FLLDWFYDVLASIGLWQKEAKILFLGLDNAGKTTLFYMLSQENL 46
Score = 51.2 bits (117), Expect = 2e-07
Identities = 29/70 (41%), Positives = 38/70 (54%)
Frame = +1
Query: 160 SVGISWSMEKVGQALVSGX*QCREDNTXTYVEDDRLAQHVPTLXPTSEXLXIGSMRFTTF 339
S+G+ W +K + L G + + + LA H PT PTSE L IG +RF F
Sbjct: 14 SIGL-W--QKEAKILFLGLDNAGKTTLFYMLSQENLAVHQPTQHPTSEELSIGRIRFKAF 70
Query: 340 DLGGHQQARR 369
DLGGH+ ARR
Sbjct: 71 DLGGHRIARR 80
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 33.5 bits (73), Expect = 0.053
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +2
Query: 188 KSGKLLFLGLDNAGKTTLXHMLKMIDLLN 274
+ ++L LGLDNAGKTT+ + L+M ++++
Sbjct: 16 REARILVLGLDNAGKTTILYRLQMGEVVS 44
>12_01_0028 +
242016-242467,242547-242918,243027-243182,245007-245089,
245159-245222,245704-246001,246616-246726,247059-247100
Length = 525
Score = 32.7 bits (71), Expect = 0.093
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 99 VXNIVQFNYIQKCLSSTGSXECWDFLVY 182
V QFN + C+S+TGS E W+ L Y
Sbjct: 342 VITFCQFNIDEPCISATGSLELWNILKY 369
>11_01_0029 +
226459-226973,227053-227424,227533-227688,229513-229595,
229665-229728,230209-230596
Length = 525
Score = 32.7 bits (71), Expect = 0.093
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 99 VXNIVQFNYIQKCLSSTGSXECWDFLVY 182
V QFN + C+S+TGS E W+ L Y
Sbjct: 363 VITFCQFNIDEPCISATGSLELWNILKY 390
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 31.9 bits (69), Expect = 0.16
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 31.9 bits (69), Expect = 0.16
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 138 KKEMRILMVGLDAAGKTTILYKLKLGEIV 166
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 31.9 bits (69), Expect = 0.16
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 31.9 bits (69), Expect = 0.16
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 31.9 bits (69), Expect = 0.16
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 31.9 bits (69), Expect = 0.16
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 30.3 bits (65), Expect = 0.49
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 188 KSGKLLFLGLDNAGKTTLXHMLKMIDLLN 274
K K+L LGLD AGKTT+ + L + ++L+
Sbjct: 15 KEMKVLMLGLDAAGKTTILYRLHIGEVLS 43
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 29.5 bits (63), Expect = 0.86
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 170 FLGLWKKSGKLLFLGLDNAGKTTLXHMLKM 259
FL K K++ +GLDNAGKTT + L +
Sbjct: 10 FLMFPAKEYKIVVVGLDNAGKTTTLYKLHL 39
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +2
Query: 176 GLWK-----KSGKLLFLGLDNAGKTTLXHMLKMIDL 268
GLWK +L LG+D AGKTTL +K I L
Sbjct: 7 GLWKYIFNKTEFHVLILGVDKAGKTTLLEKIKSIYL 42
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 197 KLLFLGLDNAGKTTLXHMLKMIDLLN 274
+++ LGLD AGKTT+ + L M ++L+
Sbjct: 19 RVVMLGLDAAGKTTILYRLHMGEVLS 44
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 188 KSGKLLFLGLDNAGKTTLXHMLKMIDLLN 274
K +++ LGLD AGKTT+ + L + ++L+
Sbjct: 16 KEMRVVMLGLDAAGKTTILYKLHIGEVLS 44
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTL 241
+K ++L +GLDN+GKTT+
Sbjct: 14 EKEMRILMVGLDNSGKTTI 32
>03_05_1048 - 29950860-29951396,29951810-29952676
Length = 467
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 120 NYIQKCLSSTGSXECWDFLVYGKSRA 197
NYIQ+ ++ST S EC F K RA
Sbjct: 420 NYIQRLIASTLSYECTSFTRKDKYRA 445
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 197 KLLFLGLDNAGKTTLXHMLKMIDLLN 274
+++ LGLD AGKTT+ + L + ++L+
Sbjct: 19 RVVMLGLDAAGKTTILYKLHIGEVLS 44
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 237 VVFPALSXPRNKSLPDFFHRPRNPNTP 157
++ ALS P + PD RP +P+TP
Sbjct: 230 ILHRALSWPASPIYPDRCRRPHHPSTP 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,913,065
Number of Sequences: 37544
Number of extensions: 119117
Number of successful extensions: 328
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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