Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0843
(370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 67 4e-12
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 36 0.009
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 32 0.11
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 32 0.11
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 31 0.19
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 31 0.34
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 31 0.34
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 31 0.34
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 31 0.34
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 31 0.34
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 31 0.34
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 30 0.45
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 30 0.45
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 30 0.45
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 29 0.79
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 28 1.8
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 28 1.8
U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical p... 28 2.4
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 28 2.4
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 27 3.2
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 3.2
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 27 3.2
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 27 3.2
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 3.2
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 27 3.2
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 26 9.7
AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical ... 26 9.7
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 66.9 bits (156), Expect = 4e-12
Identities = 30/40 (75%), Positives = 32/40 (80%)
Frame = +2
Query: 137 FILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLK 256
F+ DWF GVL LGL K GKL+FLGLDNAGKTTL HMLK
Sbjct: 3 FLWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLK 42
Score = 66.1 bits (154), Expect = 7e-12
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +1
Query: 187 KVGQALVSGX*QCREDNTXTYVEDDRLAQHVPTLXPTSEXLXIGSMRFTTFDLGGHQQAR 366
K G+ + G + ++DDR+AQHVPTL PTSE + +G + FTT+DLGGH QAR
Sbjct: 20 KKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQAR 79
Query: 367 R 369
R
Sbjct: 80 R 80
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 35.9 bits (79), Expect = 0.009
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 143 LDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLK 256
+ +F + GL KK ++ +GLDN+GKTT+ + LK
Sbjct: 1 MGFFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLK 38
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/35 (42%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 170 FLGLW-KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
F GL+ K+ ++L +GLD AGKTT+ + LK+ +++
Sbjct: 9 FKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIV 43
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKM 259
KK ++L LGLD AGKTT+ + LK+
Sbjct: 11 KKELRILMLGLDAAGKTTILYKLKL 35
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 31.5 bits (68), Expect = 0.19
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 197 KLLFLGLDNAGKTTLXHMLKMIDLLN 274
+ L LGLD AGKTT+ + LK+ + +N
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNETVN 44
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 30.7 bits (66), Expect = 0.34
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 197 KLLFLGLDNAGKTTLXHMLKMIDL 268
++L LGLDNAGKTT+ L D+
Sbjct: 19 RILLLGLDNAGKTTILKQLSSEDV 42
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 30.7 bits (66), Expect = 0.34
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 256 DDRLAQHVPTLXPTSEXLXIGSMRFTTFDLGGHQQARR 369
DD L +PT+ + + I +F +D+GG + RR
Sbjct: 174 DDMLRIRIPTMGVVQQTIEIKGTKFRIYDVGGQRSERR 211
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 30.7 bits (66), Expect = 0.34
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 197 KLLFLGLDNAGKTTLXHMLKMID 265
++L LGLDNAGKTTL M K +D
Sbjct: 18 RILILGLDNAGKTTL--MKKFLD 38
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 30.7 bits (66), Expect = 0.34
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
K+ ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKLGEIV 43
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 30.7 bits (66), Expect = 0.34
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 256 DDRLAQHVPTLXPTSEXLXIGSMRFTTFDLGGHQQARR 369
DD L +PT+ + + I +F +D+GG + RR
Sbjct: 174 DDMLRIRIPTMGVVQQTIEIKGTKFRIYDVGGQRSERR 211
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 30.7 bits (66), Expect = 0.34
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
K+ ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKLGEIV 43
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 30.3 bits (65), Expect = 0.45
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 140 ILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHML 253
+LDW + WK+ +L +GL N+GKTT +++
Sbjct: 8 VLDWIRSLF-----WKEEMELTLVGLQNSGKTTFVNVI 40
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 30.3 bits (65), Expect = 0.45
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 140 ILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLKM 259
++ +F G+ G + ++L LGLD AGKTT+ + L++
Sbjct: 4 VMSYFRGLFG-----AREMRILILGLDGAGKTTILYRLQV 38
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 30.3 bits (65), Expect = 0.45
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 140 ILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHML 253
+LDW + WK+ +L +GL N+GKTT +++
Sbjct: 8 VLDWIRSLF-----WKEEMELTLVGLQNSGKTTFVNVI 40
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 29.5 bits (63), Expect = 0.79
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 234 VFPALSXPRNKSLPDFFHRPRNPNTP 157
+ P + PR S+P FF P++P+ P
Sbjct: 466 ILPTFATPRPLSIPSFFTTPQSPHRP 491
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 188 KSGKLL-FLGLDNAGKTTLXHMLKMIDLLNM 277
+SGKLL LG AGKTTL ++L +L N+
Sbjct: 18 ESGKLLAILGSSGAGKTTLMNVLTSRNLTNL 48
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 188 KSGKLLFLGLDNAGKTTLXH 247
K K++ +GLDNAGKTT+ +
Sbjct: 16 KKYKIIVVGLDNAGKTTILY 35
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 253 EDDRLAQHVPTLXPTSEXLXIGSMRFTTFDLGGHQQARR 369
E+D L VPT + + + F FD+GG + RR
Sbjct: 182 EEDILKSRVPTSGVIQYKIMLKNFNFRIFDVGGQRAQRR 220
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 253 EDDRLAQHVPTLXPTSEXLXIGSMRFTTFDLGGHQQARR 369
E+D L VPT + + + F FD+GG + RR
Sbjct: 182 EEDILKSRVPTSGVIQYKIMLKNFNFRIFDVGGQRAQRR 220
>U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical
protein T26A5.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 182 WKKSGKLLFL-GLDNAGKTTLXHML 253
+ KSG+LL L G AGKTTL +ML
Sbjct: 57 YAKSGELLALMGASGAGKTTLLNML 81
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = +2
Query: 176 GLWKKSGK-----LLFLGLDNAGKTTLXHMLK 256
G+W+K K ++ +GLDNAGKTT K
Sbjct: 7 GIWEKFFKKKDYYVVIVGLDNAGKTTFLEQTK 38
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 235 NTXTYV--EDDRLAQHVPTLXPTSEXLXIGSMRFTTFDLGGHQQARR 369
+T YV E+D L VPT+ I F FD+GG + R+
Sbjct: 164 HTPNYVPTENDILHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRK 210
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 197 KLLFLGLDNAGKTTLXHMLKMIDL 268
+++ LGLD AGKT++ LK + +
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQM 394
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLLNMYLLXI 292
+ G LL +G AGKTTL + ++ L+++ L +
Sbjct: 2871 QSQGHLLLIGTAGAGKTTLSRFVAWLNGLSVFQLKV 2906
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 197 KLLFLGLDNAGKTTLXHMLKMIDLLNMYL 283
K++ LG GKT+L + ++ DL+N Y+
Sbjct: 11 KVIILGDSGVGKTSLMNQYEIGDLMNQYV 39
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 235 NTXTYV--EDDRLAQHVPTLXPTSEXLXIGSMRFTTFDLGGHQQARR 369
+T YV E+D L VPT+ I F FD+GG + R+
Sbjct: 164 HTPNYVPTENDILHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRK 210
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLLNMYLLXI 292
+ G LL +G AGKTTL + ++ L+++ L +
Sbjct: 2871 QSQGHLLLIGTAGAGKTTLSRFVAWLNGLSVFQLKV 2906
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 235 NTXTYV--EDDRLAQHVPTLXPTSEXLXIGSMRFTTFDLGGHQQARR 369
+T YV E+D L VPT+ I F FD+GG + R+
Sbjct: 164 HTPNYVPTENDILHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRK 210
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHML 253
KK K+L LG AGKTTL L
Sbjct: 26 KKVAKILVLGPPKAGKTTLCTFL 48
>AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical
protein Y71H2B.7 protein.
Length = 406
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +2
Query: 185 KKSGKLL---FLGLDNAGKTTLXHMLKMI 262
KK G ++ LG++ AGKTT+ LK +
Sbjct: 27 KKEGDIIHFFMLGIEGAGKTTIVRQLKCL 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,071,936
Number of Sequences: 27780
Number of extensions: 114830
Number of successful extensions: 346
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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