Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0843
(370 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical t... 73 5e-14
At3g62560.1 68416.m07028 GTP-binding protein, putative similar t... 73 5e-14
At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical t... 73 8e-14
At1g09180.1 68414.m01025 GTP-binding protein, putative strong si... 69 1e-12
At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identi... 35 0.019
At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 32 0.14
At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 32 0.14
At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 32 0.14
At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 32 0.14
At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 32 0.14
At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 32 0.14
At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 32 0.14
At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 32 0.14
At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 29 0.97
At2g15310.1 68415.m01746 ADP-ribosylation factor, putative simil... 29 0.97
At5g52210.2 68418.m06481 ADP-ribosylation factor, putative simil... 29 1.3
At5g52210.1 68418.m06480 ADP-ribosylation factor, putative simil... 29 1.3
At2g18390.1 68415.m02142 ADP-ribosylation factor-like protein 2 ... 27 2.9
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 27 3.9
At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 27 3.9
At3g49870.1 68416.m05452 ADP-ribosylation factor, putative simil... 26 9.0
At3g07050.1 68416.m00837 GTP-binding family protein contains Pfa... 26 9.0
>At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical to
SP:O04834 GTP-binding protein SAR1A. [Arabidopsis
thaliana]
Length = 193
Score = 73.3 bits (172), Expect = 5e-14
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +2
Query: 134 MFILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLK 256
MF++DWF GVL LGLW+K K+LFLGLDNAGKTTL HMLK
Sbjct: 1 MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLK 41
Score = 60.1 bits (139), Expect = 5e-10
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 LVXWSVGISWSM---EKVGQALVSGX*QCREDNTXTYVEDDRLAQHVPTLXPTSEXLXIG 318
++ W G+ S+ +K + L G + ++D+RL QH PT PTSE L IG
Sbjct: 3 MIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIG 62
Query: 319 SMRFTTFDLGGHQQARR 369
++F FDLGGHQ ARR
Sbjct: 63 KIKFKAFDLGGHQIARR 79
>At3g62560.1 68416.m07028 GTP-binding protein, putative similar to
GTP-binding protein SAR1A (SP:O04834) [Arabidopsis
thaliana]; small GTP-binding protein Bsar1a - Brassica
campestris, EMBL:U55035
Length = 193
Score = 73.3 bits (172), Expect = 5e-14
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +2
Query: 134 MFILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLK 256
MF++DWF GVL LGLW+K K+LFLGLDNAGKTTL HMLK
Sbjct: 1 MFLVDWFYGVLATLGLWQKEAKILFLGLDNAGKTTLLHMLK 41
Score = 60.1 bits (139), Expect = 5e-10
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 LVXWSVGISWSM---EKVGQALVSGX*QCREDNTXTYVEDDRLAQHVPTLXPTSEXLXIG 318
LV W G+ ++ +K + L G + ++D+RL QH PT PTSE L IG
Sbjct: 3 LVDWFYGVLATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIG 62
Query: 319 SMRFTTFDLGGHQQARR 369
++F FDLGGHQ ARR
Sbjct: 63 KIKFKAFDLGGHQIARR 79
>At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical to
GTP-binding protein (SAR1B) [Arabidopsis thaliana]
SP:Q01474
Length = 193
Score = 72.5 bits (170), Expect = 8e-14
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +2
Query: 134 MFILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLK 256
MF+ DWF G+L LGLW+K K+LFLGLDNAGKTTL HMLK
Sbjct: 1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLK 41
Score = 59.7 bits (138), Expect = 6e-10
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 LVXWSVGISWSM---EKVGQALVSGX*QCREDNTXTYVEDDRLAQHVPTLXPTSEXLXIG 318
L W GI S+ +K + L G + ++D+RL QH PT PTSE L IG
Sbjct: 3 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIG 62
Query: 319 SMRFTTFDLGGHQQARR 369
++F FDLGGHQ ARR
Sbjct: 63 KIKFKAFDLGGHQIARR 79
>At1g09180.1 68414.m01025 GTP-binding protein, putative strong
similarity to SP:Q01474 GTP-binding protein SAR1B and
SP:O04834 GTP-binding protein SAR1A [Arabidopsis
thaliana]
Length = 193
Score = 68.9 bits (161), Expect = 1e-12
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +2
Query: 134 MFILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHMLK 256
MF+ DWF G+L LGL KK K+LFLGLDNAGKTTL HMLK
Sbjct: 1 MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLK 41
Score = 58.4 bits (135), Expect = 1e-09
Identities = 33/77 (42%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 148 LVXWSVGISWSM---EKVGQALVSGX*QCREDNTXTYVEDDRLAQHVPTLXPTSEXLXIG 318
L W GI S+ +K + L G + ++D+RL QH PT PTSE L IG
Sbjct: 3 LFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIG 62
Query: 319 SMRFTTFDLGGHQQARR 369
+ F FDLGGHQ ARR
Sbjct: 63 KINFKAFDLGGHQIARR 79
>At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identical
to GP:453191 ADP-ribosylation factor 3 {Arabidopsis
thaliana}; contains domain PF00025: ADP-ribosylation
factor family
Length = 182
Score = 34.7 bits (76), Expect = 0.019
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +2
Query: 188 KSGKLLFLGLDNAGKTTLXHMLKMIDLLN 274
K ++L LGLDNAGKTT+ + L+M ++++
Sbjct: 16 KEARILVLGLDNAGKTTILYRLQMGEVVS 44
>At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus
carota].
Length = 188
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>At3g62290.1 68416.m06998 ADP-ribosylation factor identical to
GP:166586 ADP-ribosylation factor {Arabidopsis
thaliana}; ADP-ribosylation factor 1 - Arabidopsis
thaliana, PIR:S28875
Length = 181
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical
to ADP-ribosylation factor ARF1({Arabidopsis thaliana}
(SP:P36397) (GP:166586)
Length = 181
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>At1g23490.1 68414.m02948 ADP-ribosylation factor identical to
SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis
thaliana], ADP-ribosylation factor GI:166586
[Arabidopsis thaliana]
Length = 181
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 181
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLL 271
KK ++L +GLD AGKTT+ + LK+ +++
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:P91924 [Dugesia japonica]
Length = 183
Score = 29.1 bits (62), Expect = 0.97
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 188 KSGKLLFLGLDNAGKTTLXHMLKMIDLLNMY 280
K K++ +GLDNAGKTT + L + +++ +
Sbjct: 16 KEYKIVVVGLDNAGKTTTLYKLHLGEVVTTH 46
>At2g15310.1 68415.m01746 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor (GI:861205) [Chlamydomonas
reinhardtii]
Length = 205
Score = 29.1 bits (62), Expect = 0.97
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKM 259
K ++L +GLD +GKTT+ + LK+
Sbjct: 15 KSKVRILMVGLDGSGKTTILYKLKL 39
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 277 VPTLXPTSEXLXIGSMRFTTFDLGGHQQARR 369
VPT+ E + + FT +D+GG ++ R+
Sbjct: 46 VPTIGFNLETVEYKGINFTVWDIGGQEKIRK 76
>At5g52210.2 68418.m06481 ADP-ribosylation factor, putative similar
to arf-related protein (ARP) (SP:Q63055){Rattus
norvegicus}; contains Pfam domain PF00025:
ADP-ribosylation factor family
Length = 205
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Frame = +2
Query: 176 GLW-----KKSGKLLFLGLDNAGKTTLXHMLKMI 262
GLW K +L LG+D AGKTT LK I
Sbjct: 7 GLWSYMFSKTEFNVLILGIDKAGKTTFLEKLKTI 40
>At5g52210.1 68418.m06480 ADP-ribosylation factor, putative similar
to arf-related protein (ARP) (SP:Q63055){Rattus
norvegicus}; contains Pfam domain PF00025:
ADP-ribosylation factor family
Length = 205
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Frame = +2
Query: 176 GLW-----KKSGKLLFLGLDNAGKTTLXHMLKMI 262
GLW K +L LG+D AGKTT LK I
Sbjct: 7 GLWSYMFSKTEFNVLILGIDKAGKTTFLEKLKTI 40
>At2g18390.1 68415.m02142 ADP-ribosylation factor-like protein 2
(ARL2) identical to ARL2 G-protein (Halimasch; HAL;
TITAN5) GI:20514265 from [Arabidopsis thaliana];
identical to cDNA ARL2 G-protein mRNA GI:20514264;
contains Pfam profile PF00025: ADP-ribosylation factor
family; contains TIGRfam profile TIGR00231: small
GTP-binding protein domain
Length = 185
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTL 241
+K ++L +GLDN+GKTT+
Sbjct: 14 EKEMRILMVGLDNSGKTTI 32
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 197 KLLFLGLDNAGKTTLXHMLKMIDLLN 274
+++ LGLD AGKTT+ + L + ++L+
Sbjct: 19 RVVMLGLDAAGKTTILYKLHIGEVLS 44
>At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster}
Length = 192
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 197 KLLFLGLDNAGKTTLXHMLKMIDLLN 274
+++ LGLD AGKTT+ + L + ++L+
Sbjct: 19 RVVMLGLDAAGKTTILYKLHIGEVLS 44
>At3g49870.1 68416.m05452 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor-like protein 1 (SP:P40616)
[Homo sapiens]; ARF3 ADP-RIBOSYLATION FACTOR,GP:453191
Arabidopsis thaliana; contains domain PF00025:
ADP-ribosylation factor family
Length = 184
Score = 25.8 bits (54), Expect = 9.0
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 134 MFILDWFXGVLGFLGLWKKSGKLLFLGLDNAGKTTLXHML 253
M +L+ F L L +K+ +L +GL NAGKT+L +++
Sbjct: 1 MGLLEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVV 39
>At3g07050.1 68416.m00837 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 582
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 185 KKSGKLLFLGLDNAGKTTLXHMLKMIDLLNM 277
KKS + +GL N GK++L + LK ++N+
Sbjct: 251 KKSITVGIIGLPNVGKSSLINSLKRAHVVNV 281
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,550,822
Number of Sequences: 28952
Number of extensions: 103136
Number of successful extensions: 312
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 487896136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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