Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0841
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   1.3  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   1.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   1.7  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   5.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   9.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   9.2  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    20   9.2  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 234 VETHRGR-DWSHANLPHATAHHM 299
           V+ HR   DWS  +L +AT H +
Sbjct: 20  VQDHRNLLDWSKTSLDNATEHKL 42


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 234 VETHRGR-DWSHANLPHATAHHM 299
           V+ HR   DWS  +L +AT H +
Sbjct: 20  VQDHRNLLDWSKTSLDNATEHKL 42


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/27 (33%), Positives = 10/27 (37%)
 Frame = +3

Query: 243 HRGRDWSHANLPHATAHHMQDHDRYQG 323
           H G      +  H   HH Q H  Y G
Sbjct: 166 HMGHHMQEQHPQHHQPHHQQQHMMYGG 192


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +2

Query: 224 LNARGNSPRPRLVPRQPAARDRAPHAGP*PLSGCVE 331
           +  R NSP         AA   APH    P+ GC E
Sbjct: 22  VKTRSNSPEAGGGGFWLAAASGAPHPAALPIEGCNE 57


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/27 (33%), Positives = 10/27 (37%)
 Frame = +3

Query: 243 HRGRDWSHANLPHATAHHMQDHDRYQG 323
           H G      +  H   HH Q H  Y G
Sbjct: 168 HMGHHMQEQHPQHHQPHHQQQHMMYGG 194


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +2

Query: 224 LNARGNSPRPRLVPRQPAARDRAPHAGP*PLSGCVE 331
           +  R NSP         AA   APH    P+ GC E
Sbjct: 22  VKTRSNSPEAGGGGFWLAAASGAPHPAALPIEGCNE 57


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 118 QGGFDGSVSATATQAVGTSRAEFLQPGGSTSS 23
           Q  FD   S T   A+   R  F++ GG+  +
Sbjct: 213 QYSFDNQCSGTIDWALPNKRTVFIRKGGTAKA 244


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
          acetylcholinesterase protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 25 N*WIPRAAGIRHEMYQQPVSQSPK 96
          N W+P+   IRH    +P  + PK
Sbjct: 17 NIWVPQRLRIRHH-GDKPPQERPK 39


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 251 PRLVPRQPAARDRAPHAGP*PLS 319
           P + P  P A  R+P+    P+S
Sbjct: 191 PSMYPLSPGAGFRSPYPSALPIS 213


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 251 PRLVPRQPAARDRAPHAGP*PLS 319
           P + P  P A  R+P+    P+S
Sbjct: 83  PSMYPLSPGAGFRSPYPSALPIS 105


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 212 VLLELNARGNSPRPRLVP 265
           + L L  +G SP P LVP
Sbjct: 184 IALVLPTQGASPLPLLVP 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,040
Number of Sequences: 336
Number of extensions: 1579
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)