Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0841
(444 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0198 + 18973973-18974592,18974992-18975440,18976031-189761... 32 0.18
12_01_0335 - 2583476-2583493,2583919-2583965,2584151-2584274,258... 31 0.42
03_03_0004 + 13633757-13634101 29 1.7
02_03_0166 + 15887501-15887546,15888968-15889776 29 2.2
12_02_0827 + 23492583-23492633,23493018-23493566,23493722-23494012 28 2.9
07_03_0360 - 17210576-17210959,17212141-17212440 28 3.9
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 28 3.9
08_02_0826 - 21583507-21583555,21584000-21584679 27 5.1
06_03_0074 - 16233681-16233981,16234258-16234670,16235240-16235440 27 5.1
02_05_0061 + 25506648-25509399,25509564-25509901,25510392-255105... 27 5.1
02_04_0243 + 21244743-21245837,21245921-21246148,21246240-212464... 27 5.1
12_01_1078 - 11202284-11202343,11202941-11203000,11203036-112030... 27 6.8
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 27 6.8
06_03_1494 + 30554997-30555608,30555707-30555915,30556006-305561... 27 6.8
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 27 6.8
04_03_0643 + 18328807-18331969,18332560-18332627 27 6.8
03_02_0162 + 6053144-6053365,6053474-6053548,6054477-6054623,605... 27 6.8
01_06_0073 + 26191822-26192116,26192227-26192445,26193655-261938... 27 6.8
04_03_0218 + 12780061-12780150,12780864-12781394 27 9.0
01_07_0385 - 43212580-43213142,43213234-43213612 27 9.0
01_06_1402 + 37052996-37053449,37053533-37053630,37053718-370538... 27 9.0
>05_04_0198 +
18973973-18974592,18974992-18975440,18976031-18976166,
18976252-18976323,18976389-18976457,18976546-18976617,
18978192-18978250,18978643-18978734
Length = 522
Score = 32.3 bits (70), Expect = 0.18
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = -1
Query: 339 RSCSTHPDSGHGPACGARSRAAGWRGTSLGRGEFPRAFSSNRTGLAFLFFCAPTAADVTH 160
RS PD +G C A W G + +G+ PR S N + + + + A +T
Sbjct: 365 RSLQNIPDDWNGDPCMPHGYA--WTGVTCDKGQIPRVISLNFSSMGLSGYLSSDIARLTA 422
Query: 159 SADIHAA 139
DI A
Sbjct: 423 LTDISFA 429
>12_01_0335 -
2583476-2583493,2583919-2583965,2584151-2584274,
2584421-2584665,2585281-2585404,2585424-2585456
Length = 196
Score = 31.1 bits (67), Expect = 0.42
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 12 AAALELVDPPGCRNSARDVPTACVAVAETEPS 107
AAA+ +VDP GC R VP A + T PS
Sbjct: 17 AAAVAVVDPSGCELRDRTVPHATSSAPSTAPS 48
>03_03_0004 + 13633757-13634101
Length = 114
Score = 29.1 bits (62), Expect = 1.7
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +2
Query: 44 LQEFGTRCTNSLCRSRRNRTIKPTLLTSHCWIAA*MSAEWVTSAAVGAQKKRNASPVLLE 223
+Q + +++ + RN+T H +AA + VT AA A +R+ V+
Sbjct: 8 MQRLARQAAHAVTQRARNQTAATARGYHHAGVAA-AGGKNVTPAAAAA--RRHPDVVVTI 64
Query: 224 LNARGNSPRPRLVPRQPAAR 283
A G PRP ++ AAR
Sbjct: 65 EEAAGAGPRPSSTSQEDAAR 84
>02_03_0166 + 15887501-15887546,15888968-15889776
Length = 284
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 300 ACGARSRAAGWRGTSLGRGEFPRAFSSN 217
+CG +AAG G LGRG P +SN
Sbjct: 196 SCGEMEKAAGLLGMMLGRGFVPHYAASN 223
>12_02_0827 + 23492583-23492633,23493018-23493566,23493722-23494012
Length = 296
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 175 CRRYPLR*HSRRDPAMTGKQGGFDGSVSATATQAVGTSRAEFLQPGGSTSSRAAA 11
CRR R +++ + + +QGG G+ +A AT + T+ S ++ AAA
Sbjct: 143 CRRNTKR-STKKSSSSSSRQGGGAGNAAAAATSSSSTTSTSTTATTSSAAAPAAA 196
>07_03_0360 - 17210576-17210959,17212141-17212440
Length = 227
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 291 ARSRAAGWRGTSLGRGEFPRAFSSNRTGLA 202
A + + GW G GRGE RA S G+A
Sbjct: 64 APAGSGGWDGDGDGRGELCRAAGSKAAGMA 93
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Frame = -1
Query: 354 QRHPWRSCSTHPDSGHGPACGA------RSRAAGWRGT 259
QR+P T P++G G + G+ RSRAA W GT
Sbjct: 1424 QRYPSMDNITTPNNGSGLSSGSNSSSFSRSRAASWSGT 1461
>08_02_0826 - 21583507-21583555,21584000-21584679
Length = 242
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 324 HPDSGHGPACGARSRAAGWRGTSLGRGEFPRAFSSNRT 211
H SG G A SRA + G+ G+G P RT
Sbjct: 202 HGGSGAGSGSYAGSRAGSYAGSGHGKGSTPPEHREQRT 239
>06_03_0074 - 16233681-16233981,16234258-16234670,16235240-16235440
Length = 304
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 130 MTGKQGGFDGSVSATATQAVGTSRAEFLQPGGSTSSRAAA 11
M+G GG DG + A A TSRA+ + S A+
Sbjct: 1 MSGGNGGVDGVLLAAAVPREATSRAQATEAASDGSGSGAS 40
>02_05_0061 +
25506648-25509399,25509564-25509901,25510392-25510593,
25510779-25510854,25512036-25512294
Length = 1208
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -1
Query: 342 WRSCSTHPDSGHGPACGARSRAAGWRGTSLGRGEFPRAFSSNRTGLAFL 196
W + S HP G ACG A SLG S L+FL
Sbjct: 56 WWNASNHPCRWRGVACGRGRHAGSVVALSLGSSSLSGLISPFLGNLSFL 104
>02_04_0243 +
21244743-21245837,21245921-21246148,21246240-21246458,
21246557-21247000,21247440-21247547,21247790-21247909
Length = 737
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 121 KQGGFDGSVSATATQAVGTSRAEFLQPGGSTSSRAAAP 8
K G + ++ AT A+G + ++PG + S+AAAP
Sbjct: 467 KLRGKEAAMRQNATAAIGGKGSMSVKPGRNEQSKAAAP 504
>12_01_1078 -
11202284-11202343,11202941-11203000,11203036-11203050,
11203322-11204026
Length = 279
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 321 PDSGHGPACGARSRAAGWRGTSLGRGEFPRAFSSNRTG 208
P G GARSRA+ W +G + RA + R G
Sbjct: 170 PLGGAAAGTGARSRASTWHNVLIGMQKRARAAIAAREG 207
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 37 PRAAGIRHEMYQQPVSQSP-KPNHQTHLAYQ 126
P+A+ + H+ QQP QSP +P Q +Q
Sbjct: 104 PQASHLGHQQLQQPTQQSPFQPTAQHQAPFQ 134
>06_03_1494 +
30554997-30555608,30555707-30555915,30556006-30556155,
30556254-30556312,30556852-30556961,30557216-30557322,
30557443-30557581,30557705-30557821,30557918-30558025,
30558221-30558292,30558783-30558948,30559044-30559165,
30559245-30559382,30559462-30559604,30559699-30559761,
30560107-30560170,30560238-30560373,30560478-30560551,
30560640-30560734,30560829-30560860,30560973-30561175
Length = 972
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 31 WIPRAAGIRHEMYQQPVSQSPKPNH 105
W P A H +QQP + S +P H
Sbjct: 69 WRPATAAAEHLGHQQPYNSSVRPQH 93
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 164 VTSAAVGAQKKRNASPVLLELNARGNSPRPRLVPRQPAARDRAPHA 301
V+ + G ++R+++PV + SP PR P+ R+R+ A
Sbjct: 265 VSPSPSGRSRRRSSAPVTPSEKNKAASPYSPQCPRTPSNRERSSRA 310
>04_03_0643 + 18328807-18331969,18332560-18332627
Length = 1076
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 24 ELVDPPGCRNSARDVPTACVAVAETEPSNPPCLPVI 131
EL G R R P AC AE + P LP++
Sbjct: 215 ELKQNLGVRGRKRGRPVACSTTAEARRTELPVLPIV 250
>03_02_0162 +
6053144-6053365,6053474-6053548,6054477-6054623,
6054749-6055300,6055387-6055622,6055914-6056130
Length = 482
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 91 ATATQAVGTSRAEFLQPGGSTSSRAAAPXV 2
AT + +G +AEFL PGGS R A +
Sbjct: 70 ATGCEILG--KAEFLNPGGSVKDRVAVKII 97
>01_06_0073 +
26191822-26192116,26192227-26192445,26193655-26193803,
26193910-26194186,26194683-26194963
Length = 406
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3
Query: 139 DPAMTGKQGGFDGSVSATATQAVGTSRAEFLQPGGSTSSRA 17
DP G GF S +A A+G R + QP +T++ +
Sbjct: 347 DPQKFGSWDGFHPSEAAYKAIAIGLLRGSYTQPSFATTTNS 387
>04_03_0218 + 12780061-12780150,12780864-12781394
Length = 206
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 336 SCSTHPDSGHGPACGARSRAAGWRGTSLGRGEFPRAFSSNRT 211
+C +H D GHGP G R+ RG ++G P + T
Sbjct: 136 TCPSHGDMGHGP-LGHRA-GISLRGKAIGENTSPLSLPGKGT 175
>01_07_0385 - 43212580-43213142,43213234-43213612
Length = 313
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -3
Query: 193 LLRPNRCRRYPLR*HSRRDPAMTGKQGGFDGSVSATATQAVGTS 62
LLR R R RR A TG+ GG DG S+ A +
Sbjct: 156 LLRQVHQHRRGRRQDVRRHHAHTGRHGGGDGGASSVVVSAAAAA 199
>01_06_1402 +
37052996-37053449,37053533-37053630,37053718-37053888,
37054017-37054117,37054928-37055063,37055155-37055205,
37055311-37055598,37055896-37056130,37056408-37056523,
37057300-37057496,37057739-37057745
Length = 617
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 36 PPGCRNSARDVPTACVAV-AETEPSNPPCLPVIAGSRRE 149
PP NSA P A A AE +P PP P RR+
Sbjct: 73 PPARPNSALPPPPAAAAANAEAKPQPPPPPPPARTRRRD 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,413,808
Number of Sequences: 37544
Number of extensions: 228195
Number of successful extensions: 1017
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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