Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0840
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.0  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +3

Query: 435 NNIPDHQPYYEDNLPSPQ-PPVYSSPTATTRNPR*Y-RATTRVRRIYPESSTSRHYP 599
           NN PD    Y+  LP+P      SSPT +  +   +  A++    IY + +   + P
Sbjct: 178 NNSPDQYQSYQILLPTPTCSEASSSPTPSHSSESSFSAASSYTNTIYHQENFENYEP 234


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 85  DSGQNSGAPSISTVMTE---EIPIIHHPGGMSSPQDDEMLSPTNNA 213
           D  Q +  PS  T   E   EIP+   P  ++SP   E  S T +A
Sbjct: 65  DGWQVTPLPSDGTTSPEPDPEIPVAPEPAPLASPLVQEPGSSTTSA 110


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 4   KPNSPEYSVPQNNARPFNLAFRNDGY 81
           KPN+P+  V        N+   N+GY
Sbjct: 747 KPNNPDIKVEDGTLTINNIQKTNEGY 772


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 630 YWKRISILTTTPALCRFRK 686
           YW++ S LTT+  L  +R+
Sbjct: 25  YWQQTSNLTTSKLLYTYRQ 43


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 393 PQAGSTPT 416
           PQAGSTPT
Sbjct: 182 PQAGSTPT 189


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 379 FDLNSIKNESFG 344
           FDLN+ KN+S G
Sbjct: 371 FDLNNKKNQSLG 382


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 379 FDLNSIKNESFG 344
           FDLN+ KN+S G
Sbjct: 356 FDLNNKKNQSLG 367


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,530
Number of Sequences: 336
Number of extensions: 3860
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)