Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0840
(751 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces pomb... 32 0.10
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.40
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 29 0.71
SPBC119.11c |pac1|hcs|double-strand-specific ribonuclease Pac1|S... 29 0.71
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.94
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 29 0.94
SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 27 2.2
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 27 2.2
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 2.9
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 27 3.8
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 23 4.9
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 26 5.0
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 26 5.0
SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces ... 26 6.6
SPAC12G12.10 |||WD repeat protein, human WDR21 family|Schizosacc... 26 6.6
SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|... 26 6.6
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 25 8.7
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 8.7
SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces po... 25 8.7
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 8.7
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 25 8.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 8.7
>SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 476
Score = 31.9 bits (69), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +1
Query: 10 NSPEYSVPQNNARPFNLAFRNDGYRDSGQNSGAPSISTVMTEEIPIIHHPGGMSSPQDDE 189
N P + PQ N LAF +DG+ D ++ AP+ ST+ + + ++ DD+
Sbjct: 284 NEPSPAQPQTNTSA-PLAFEDDGFGDFQSSAAAPASSTLNNASLFMGSQTASTAAKNDDD 342
Query: 190 MLSPTNNA 213
+A
Sbjct: 343 AFDDFQSA 350
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 384 PDQPQAGSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSS 506
P PQ+ P T+ R +IP P +PS PP+ SS
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSS 170
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 29.1 bits (62), Expect = 0.71
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 70 NDGYRDSGQNSGAPSISTVMTEEIPIIHHPGGMSSPQDDEMLSPTNNAQYYAS 228
N G+R S QNS S +V + + GG S ++E+LS N+ S
Sbjct: 131 NSGFRSSNQNSSLKSFQSVPDSNVNVFGGFGG-SVVDNNELLSTGKNSHQTTS 182
>SPBC119.11c |pac1|hcs|double-strand-specific ribonuclease
Pac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 29.1 bits (62), Expect = 0.71
Identities = 19/70 (27%), Positives = 26/70 (37%)
Frame = +3
Query: 372 RSKMPDQPQAGSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATTRNPR*YRATT 551
R P + S P Q NN P + + E P P PP+ S + + +
Sbjct: 96 RQNEPVIEEPSSHPKNQKNQENNEPTSEEFEEGEYPPPLPPLRSEKL----KEQVFMHIS 151
Query: 552 RVRRIYPESS 581
R IYP S
Sbjct: 152 RAYEIYPNQS 161
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 0.94
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +3
Query: 411 PTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATTRNPR*YRATTRVRRIYPESSTS 587
PT+T IP D SP P +S T +T P +TT V P +STS
Sbjct: 253 PTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTS 311
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 28.7 bits (61), Expect = 0.94
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 551 SSPQDLSREFDESPLPELHHKSKSEA 628
S+PQD S+ +E P+P+L + K A
Sbjct: 147 STPQDSSKPIEEKPMPDLGAEQKESA 172
>SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit
Cgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 412
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 564 IYPESSTSRHYPNYTTNQSPKRYWKRISILTTTP 665
I PE S Y NY T SP Y+ ++++ P
Sbjct: 199 ITPEEVLSSGYGNYITTISPGEYFGELALMYNAP 232
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 554 SPQDLSREFDESPLPELHHKSKSEAL-LETNFDFDDDTSPLPISE 685
+P+DL ++ ++ P P+++ KS+ L+T+ D+ S L S+
Sbjct: 86 NPEDLGKKVEKGPRPDIYDLKKSQQFELDTSRLSSDEESVLDYSK 130
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 509 YSDNTQSEMIPSYDSSPQDLSREFDESPLPELHHKSKSEALLETNFDFDDDTS 667
Y + E SYD+ S SP P S SE LL+ + ++ S
Sbjct: 215 YDELNLDEASASYDAERSGRSSSSSHSPSPSASSSSSSENLLQDKAEAEEKVS 267
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 321 GAPNYGGQPKLSFLMELRSKMPDQPQAGSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVY 500
G P + LS +E S P QA TP+ +F IP + DNL +
Sbjct: 653 GLPRFEYHTSLSKSLE-HSSTPASLQATKTPSPSFVLEPGIPQEYKKHFDNLSEERRQCL 711
Query: 501 SSPTAT 518
+ T T
Sbjct: 712 TPSTPT 717
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 23.0 bits (47), Expect(2) = 4.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 429 QRNNIPDHQPYYEDNLP 479
+RN+ PD Q +Y++ +P
Sbjct: 7 RRNHAPDWQDFYKNGVP 23
Score = 21.4 bits (43), Expect(2) = 4.9
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 483 PQPPVYSSPTAT 518
PQPP SSP+ T
Sbjct: 56 PQPPSSSSPSTT 67
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 26.2 bits (55), Expect = 5.0
Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 12/113 (10%)
Frame = +3
Query: 231 HSAAARSRRSDDNLEFKRDPDKEGKMYGPYGAPNYGGQPKLSFLMELRSKMPDQPQAGST 410
HSA A D + +GK Y + + +P+ + + M D ST
Sbjct: 555 HSAVAEENEEVDEELLNVPSNNQGKSYRRFSSDAVWEEPESNEFPRVSGTMEDYDSREST 614
Query: 411 PTT------TFGQRNNIPDHQPYYEDN-----LPSP-QPPVYSSPTATTRNPR 533
T T +PD + DN LP P +P P + +PR
Sbjct: 615 GHTIKELRSTPNSHGTVPDDSIFAMDNEENSELPPPLEPAEIGDPFRSVNDPR 667
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 477 PSPQPPVYS-SPTATTRNPR*YRATTRVRRIYPESSTSR 590
P+P P +P +TT P TR++RI+ ++S SR
Sbjct: 184 PNPSTPSNGPAPVSTTATPS-RNPVTRLQRIFSQNSVSR 221
>SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +3
Query: 444 PDH---QPYYEDN-LPSPQPPVYSSPTATTRN 527
PDH QP +N LP+P+PP +S A + N
Sbjct: 234 PDHKVSQPSETENFLPTPEPPKIASANAGSSN 265
>SPAC12G12.10 |||WD repeat protein, human WDR21
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 420
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 591 HYPNYTTNQSPKRYWKRISILTTTPA 668
H P Y N KRY++ IS +TP+
Sbjct: 7 HIPGYYYNSEKKRYFRIISSGQSTPS 32
>SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 468
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 603 YTTNQSPKRYWKRISILTTTPALCRFRKLSLA 698
Y N P RYWK ++L + + SLA
Sbjct: 403 YVPNDKPHRYWKFTALLEASATFISYPFQSLA 434
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 1 KKPNSPEYSVPQNNARPFNLAFRN 72
KK S EYSVPQ NL F N
Sbjct: 138 KKLTSYEYSVPQEFIDDMNLMFSN 161
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 8.7
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = +1
Query: 100 SGAPSISTVMTEEIPIIHHPGGMSSPQDDEMLSPTNNAQYYASDTLPLRDLGDLMII*NS 279
S +PS ++ +EE+ + P+ +M P NN R M+ NS
Sbjct: 140 SRSPSYASYNSEEVNFQSYQDPRLLPRTSQMYMPDNNYSPAVKSPAAQRRSSSYMVPANS 199
Query: 280 RG 285
RG
Sbjct: 200 RG 201
>SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 91 GQNSGAPSISTVMTEEIPIIHHP 159
GQ SGA +S + E IIH+P
Sbjct: 100 GQGSGAALLSQFLKEHTRIIHNP 122
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 25.4 bits (53), Expect = 8.7
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +3
Query: 477 PSPQPPVYSSPTATTRNPR*YRATTRVRRIYPESSTSRHYPNYTTNQSPKRYWKRISILT 656
PSP P V+ + + +T+ V RI ESS + + + Q+ + + ISIL
Sbjct: 345 PSPPPEVHLTGEILKPRKKRQESTSSVHRIGKESSDRK---DGISGQNKLQQFATISILN 401
Query: 657 TTPALCRFRKLSLAQSTLE 713
T A S+ + E
Sbjct: 402 NTNATSHLGNQSVRERAPE 420
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 483 PQPPVYSSPTATTRN 527
PQPP+Y+S TTR+
Sbjct: 394 PQPPLYNSTLTTTRS 408
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect = 8.7
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 477 PSPQPPVYSSPTATTRNPR*YRATTRVRRIYPESSTSRHYPNYTTNQSPKRYWKRISILT 656
P P+PPV S P + T+ ++ V PE T+ P +T+ + Y R SI
Sbjct: 161 PLPKPPVPSVPVSKTKRRTKHKLAPVVE--VPE-ITNEVSPKFTSTNDEQVYRLR-SIRA 216
Query: 657 TTP-ALCRFR 683
+P ++C F+
Sbjct: 217 GSPNSVCSFQ 226
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,155,140
Number of Sequences: 5004
Number of extensions: 67883
Number of successful extensions: 233
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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