Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0840
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 34 0.11
SB_58242| Best HMM Match : PUCC (HMM E-Value=0.14) 32 0.57
SB_8542| Best HMM Match : PT (HMM E-Value=4) 31 0.76
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 31 1.00
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 31 1.3
SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) 30 1.7
SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_10994| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 3.0
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 3.0
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_39727| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_53427| Best HMM Match : RVT_1 (HMM E-Value=0.031) 29 5.3
SB_45246| Best HMM Match : zf-MYND (HMM E-Value=0.19) 29 5.3
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 29 5.3
SB_38991| Best HMM Match : Utp12 (HMM E-Value=0.98) 28 7.0
SB_54819| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 34.3 bits (75), Expect = 0.11
Identities = 38/135 (28%), Positives = 49/135 (36%), Gaps = 1/135 (0%)
Frame = +3
Query: 225 IGHSAAARSRRSDDNLEFKRDPDKEGKMYGPYGAPNYGG-QPKLSFLMELRSKMPDQPQA 401
IG + R S D+ DPD K P G N G + L EL +K P Q +
Sbjct: 45 IGKNQTERQSWSSDST--LSDPDTP-KGPSPDGKVNEPGLRQHTKGLRELPTK-PSQSTS 100
Query: 402 GSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATTRNPR*YRATTRVRRIYPESS 581
S+ T F + P P + P P V+ TR P + P SS
Sbjct: 101 QSSGTPEFSRIGRSPIVSPVSREFSPKPTRTVFEFQPQITRQPSFEERKPLHSPVSPTSS 160
Query: 582 TSRHYPNYTTNQSPK 626
S PN +PK
Sbjct: 161 FSEASPNTPPKTAPK 175
>SB_58242| Best HMM Match : PUCC (HMM E-Value=0.14)
Length = 784
Score = 31.9 bits (69), Expect = 0.57
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 405 STPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATT--RNPR*YRATTRVRRIYPES 578
STP T +I PYY P PVYS+P TT ++P Y T R I P
Sbjct: 104 STPVHT----TDIQHPGPYYRYTAPRSILPVYSTPVHTTSIQHPGPYYQYTAPRSILPVY 159
Query: 579 STSRH 593
+T H
Sbjct: 160 NTPVH 164
>SB_8542| Best HMM Match : PT (HMM E-Value=4)
Length = 650
Score = 31.5 bits (68), Expect = 0.76
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Frame = +3
Query: 309 YGPYG--APNY--GGQPKLSFLM----ELRSKMPDQPQAGSTPTTTFGQRNNIPDH-QPY 461
Y PYG P Y G P+ + + + R PQ P+ R +P + QP
Sbjct: 346 YYPYGNPQPKYYPSGNPQSRYYLYGNPQSRYYPSGNPQPRYYPSGNPQPRYYLPGNPQPR 405
Query: 462 YEDNLP-SPQPPVYSSPTATTRNPR*YRATTRVRRIYPESSTSRHYPNYTTNQSPKRY 632
Y LP +PQP Y S +T + +++T +V ++ ++ R+YP + N P+ Y
Sbjct: 406 YY--LPGNPQPRYYRSWKSTVQVLPLWKSTAQVLPLWKSTAQPRYYP--SGNPQPRYY 459
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.1 bits (67), Expect = 1.00
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +3
Query: 420 TFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATTRNPR*YRATTRVRRIYPESSTSRHYP 599
T Q N+P +QPY + N P+ QP + PT N + T + P + +
Sbjct: 197 TLHQPTNLPPNQPYKQTNQPTNQPT--NQPTNQPTNQPTNQPTNQPTN-QPTNQPTNQPT 253
Query: 600 NYTTNQS 620
N TNQ+
Sbjct: 254 NQPTNQT 260
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 396 QAGSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATTRNP 530
Q + PT + N P +QP NLP+ QP + TT P
Sbjct: 247 QPTNQPTNQPTNQTNQPTNQPNQPTNLPTDQPTNQPANLQTTHAP 291
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 31.1 bits (67), Expect = 1.00
Identities = 27/128 (21%), Positives = 58/128 (45%)
Frame = +3
Query: 246 RSRRSDDNLEFKRDPDKEGKMYGPYGAPNYGGQPKLSFLMELRSKMPDQPQAGSTPTTTF 425
+ R+ N + K+ ++GK GP + G + S +S+ ++ + STP+ +
Sbjct: 85 KPRKDSSNSDTKKKHKRKGKSSGP----DDGNRTTGSLSPVSKSRWKERTPSDSTPSKSR 140
Query: 426 GQRNNIPDHQPYYEDNLPSPQPPVYSSPTATTRNPR*YRATTRVRRIYPESSTSRHYPNY 605
++P P E+ + P P Y + + +P Y+ +++ P+ + S + P
Sbjct: 141 DSFRHVPIVSPPLEEPVSPPLPWAYRKHSPSV-SPPIYKGREQLKSKSPKRTWS-NSPFR 198
Query: 606 TTNQSPKR 629
++SP R
Sbjct: 199 HKSRSPFR 206
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = +3
Query: 453 QPYYEDNLPSPQPPVYSSPTATTRNPR*YRATTRVRRIYPESSTSRHYPNYTTNQSPKRY 632
+P E P QPP P TR P + R PE+ T R P T PK Y
Sbjct: 265 KPRTEKPRPITQPPTTQRPRPKTRRPEPRTELPQPRTYRPETRTYRPDPR-TYRPDPKTY 323
>SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14)
Length = 1085
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 393 PQAGSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTAT--TRNPR*YRATTRVRRI 566
P G+T TTT NN ++P + L P P ++ T N YR + + +
Sbjct: 512 PPPGTTTTTTAPWNNNNNHYRPLEQQQLLLPSPGTTTTTTTVPWNNNNNYYRPLEQQQLL 571
Query: 567 YPESSTSRHYPNYTTNQSPKRYWKRI 644
P +T+ N + Y++R+
Sbjct: 572 LPPGTTTTTTTTACCNNN-NYYYRRL 596
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 393 PQAGSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATT-RNPR*YRATTRVRRIY 569
P G+T TTT NN ++P + L P P ++ T N YR + +++
Sbjct: 753 PSPGTTTTTTAPWNNNNNYYRPLEQQQLLLPSPGTTTTTTTVPWNNNNYYRPLEQQQQLL 812
Query: 570 PESSTS 587
P T+
Sbjct: 813 PSPGTT 818
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 369 LRSKMPDQPQAGSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTAT-TRNPR*YRA 545
L K P G+T TTT NN ++P + P P ++ TA N YR
Sbjct: 715 LEQKQQLLPSPGTTTTTTTVPWNNYYYYRPLEQQQQLLPSPGTTTTTTAPWNNNNNYYRP 774
Query: 546 TTRVRRIYPESSTS 587
+ + + P T+
Sbjct: 775 LEQQQLLLPSPGTT 788
>SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 378 KMPDQPQAGSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATT 521
+ P+QP G PT GQ+ N P Q + P P PT TT
Sbjct: 67 QQPNQP-TGQQPTDPTGQQPNDPTGQQPTDPTGQQPNQPTGQQPTDTT 113
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +3
Query: 378 KMPDQPQAGSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATT 521
+ P+ P G PT GQ+ N P Q + P P PT TT
Sbjct: 83 QQPNDP-TGQQPTDPTGQQPNQPTGQQPTDTTDQQPNQPTGQQPTDTT 129
>SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 474 LPSPQPPVYSSPTAT---TRNPR*YRATTRVRRIYPESSTSRHYPNYTTNQSPKR 629
+P PP +SP + +R+PR +R+T+R R S S Y + ++SP+R
Sbjct: 486 VPPSTPPKKTSPDQSRSRSRSPRSHRSTSRSPRRRHSPSVSPPYRRRSRSRSPQR 540
>SB_10994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +2
Query: 512 SDNTQSEMIPSYDSSPQDLSREFDESPLPELHHKSKSEALLETNFDFDDDTSPLPISEAV 691
SD T S D +P SR D +P+P + L D D +P P S+
Sbjct: 92 SDRTPVPPSRSSDLTPVPPSRRSDLAPVPPSRRSDLTPVPLSRRSDLRSDWTPAPPSKIC 151
Query: 692 ART 700
RT
Sbjct: 152 GRT 154
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Frame = +3
Query: 288 PDKEGKMYGPYGAPNYGGQPKLSFLMELRSKMPDQPQA-------GSTPTTTFGQRNNIP 446
P K G P P G P SF + P + QA +TP R+ +P
Sbjct: 272 PPKRGSSNPP--PPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVP 329
Query: 447 DHQPYYEDNLPSPQPPVYSSPTATTRNP 530
P + P PP+ PT+T P
Sbjct: 330 LPPPPLRGQIAPPPPPISKPPTSTRSAP 357
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 515 DNTQSEMIPSYDSSPQDLSREFDESPLPELHHKSKSEALLETNFDFDDDTSPLPISEAVA 694
+ TQS+ P +S D +R +D+ P P + K++ + + ++ TSP P +
Sbjct: 964 ETTQSKDRPPAES---DRNRSWDKQPSPRIGRKNQQQLTIPSDSSSSPSTSPQPARRNIP 1020
Query: 695 RTVNFRNGN 721
V +G+
Sbjct: 1021 IIVRPSDGD 1029
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Frame = +3
Query: 288 PDKEGKMYGPYGAPNYGGQPKLSFLMELRSKMPDQPQA-------GSTPTTTFGQRNNIP 446
P K G P P G P SF + P + QA +TP R+ +P
Sbjct: 184 PPKRGSSNPP--PPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVP 241
Query: 447 DHQPYYEDNLPSPQPPVYSSPTATTRNP 530
P + P PP+ PT+T P
Sbjct: 242 LPPPPLRGQIAPPPPPISKPPTSTRSAP 269
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 345 PKLSFLMELRSKMPDQPQAGSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATTR 524
PK S L + ++ P P S+P T G + + +P + P P + TT+
Sbjct: 401 PKSSALTGVTARKPSMPGPTSSPGATQGSTDGVVSAKPPTKKTTPQSVIPPGKTTAPTTK 460
Query: 525 NP 530
P
Sbjct: 461 PP 462
>SB_39727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Frame = +3
Query: 291 DKEGKMYGPYGAPNYGGQPKLSFLMELRSKMPDQPQAGSTPTTTFGQRNNIPDHQPYYED 470
D G+ Y G G LS E +P TP TT Q NN P +
Sbjct: 160 DFGGRHYLVVGDRLSGWVEVLSSTAECNQTVPPAEPVAETPPTT--QANNDPVSSCMPDA 217
Query: 471 NLPSPQP-PVYSSPTATTRNPR*YRATT 551
+ +PQP P PT P+ Y T
Sbjct: 218 SSQAPQPLPEPRRPTRARTRPKRYEPET 245
>SB_53427| Best HMM Match : RVT_1 (HMM E-Value=0.031)
Length = 969
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +3
Query: 354 SFLMELRSKMPDQPQAGSTPTTTFGQRNNIPDHQ-----PYYEDNL-PSPQPPVYSSPTA 515
+ L E++S+ A +PT+T N P HQ P + ++ SPQP YSSP A
Sbjct: 97 AMLKEIQSQQSATVVAVYSPTSTAPSSPNTPRHQTDSRLPIAKTSIEASPQPISYSSPFA 156
>SB_45246| Best HMM Match : zf-MYND (HMM E-Value=0.19)
Length = 1828
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 554 SPQDLSREFDESPLPELHHKSKSEALLETNFDFDDD 661
S DL D P+L +K S++ L T+ D DDD
Sbjct: 1362 SATDLKEAHDNEWDPQLEYKIPSKSSLRTSADLDDD 1397
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 28.7 bits (61), Expect = 5.3
Identities = 28/135 (20%), Positives = 54/135 (40%)
Frame = +3
Query: 222 RIGHSAAARSRRSDDNLEFKRDPDKEGKMYGPYGAPNYGGQPKLSFLMELRSKMPDQPQA 401
+ G + S S N + ++ + GKM G G+ + GG+PK + + D+ Q
Sbjct: 716 KFGTGTPSNSEASQGNPDANQE-NITGKMTGKNGSESPGGEPKKEKNVSQAASNVDKEQK 774
Query: 402 GSTPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATTRNPR*YRATTRVRRIYPESS 581
S T+ N+ ++ + +P+ + S T + P R E+
Sbjct: 775 SSGSTSDSKNTNSSNGNKEKLLSQISTPKETLSDS---TDKRPVLELPRPVDNRKPAETQ 831
Query: 582 TSRHYPNYTTNQSPK 626
+ PN + ++ PK
Sbjct: 832 DNSEVPNKSVSRLPK 846
>SB_38991| Best HMM Match : Utp12 (HMM E-Value=0.98)
Length = 809
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 506 SYSDNTQSEMIPSYDSSPQDLSREFDESPLPELHHKSKSE 625
+YS N ++ P +S PQ + + DES P H K + +
Sbjct: 562 NYSGNGKAVEKPREESIPQQTTSKRDESKTPSQHRKQQEK 601
>SB_54819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 576 SSTSRHYPNYTTNQSPKRYWKRISILTTTPALCRFRKLSLAQS 704
S +S H+P T +SP Y R + +P++ R +++ +S
Sbjct: 43 SPSSSHHPQITIVRSPSSYHHRHITIVISPSIYHHRHITILRS 85
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +3
Query: 309 YGPYGAPNYGGQPKLSFLMELRS-KMPDQPQAG-STPTTTFGQRNNIPDHQPYYEDNLPS 482
+ P+G P G P+ R +P QPQ +T GQ P H ++ P
Sbjct: 379 FRPHGPPARMGLPQPLLENGNRGVPVPPQPQLPVNTSKIKVGQ-GAAPPHTAQHQQPQPL 437
Query: 483 PQPPVYSSPTATTRNP 530
P PV P+A P
Sbjct: 438 PMQPVQQQPSAQQPQP 453
>SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1002
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 405 STPTTTFGQRNNIPDHQPYYEDNLPSPQPPVYSSPTATT 521
STP T G D P + PS QPP +S T TT
Sbjct: 177 STPNTAGGITGQ--DRAPIPPSSSPSAQPPTTTSTTTTT 213
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,744,019
Number of Sequences: 59808
Number of extensions: 515164
Number of successful extensions: 1715
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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