BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0840 (751 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 27 0.19 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.43 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 26 0.43 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.3 Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 7.1 EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 7.1 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 7.1 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 7.1 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 27.1 bits (57), Expect = 0.19 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +3 Query: 372 RSKMPDQPQAGSTPTTTFGQRNNIPDHQPYYEDNL-PSPQPPVYSSPTATT 521 ++++ + Q G + G + H+P E N PSP P + S+P+++T Sbjct: 475 QAQLGGERQNGRKDSGYDGAASTAVIHEPVVETNSSPSPNPRIASAPSSST 525 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 25.8 bits (54), Expect = 0.43 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%) Frame = +3 Query: 261 DDNLEFKRDPDKEGKMYGPYGAP--NYGGQ 344 DD + D+ G YG YGAP +YG + Sbjct: 1808 DDPANCAPEEDQYGSQYGQYGAPYDHYGSR 1837 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 25.8 bits (54), Expect = 0.43 Identities = 9/20 (45%), Positives = 15/20 (75%) Frame = +1 Query: 499 TPVLQRQHAIRDDTELRLES 558 TPV +Q +++DTEL L++ Sbjct: 14 TPVFTKQKKVKEDTELNLQT 33 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 22.2 bits (45), Expect = 5.3 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +3 Query: 483 PQPPVYSSPTATTRNPR*YRATTRVR 560 P P + +P T P Y AT+R+R Sbjct: 1171 PSPFMAGAPNVPTILPEQYFATSRIR 1196 Score = 21.4 bits (43), Expect = 9.3 Identities = 13/51 (25%), Positives = 21/51 (41%) Frame = +3 Query: 444 PDHQPYYEDNLPSPQPPVYSSPTATTRNPR*YRATTRVRRIYPESSTSRHY 596 P H P +LP+ ++ T TT ATT + + + RH+ Sbjct: 93 PLHPPASSTSLPATITTTTTTTTTTTATAA-ATATTTATGLIKQETLQRHH 142 >Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 protein. Length = 402 Score = 21.8 bits (44), Expect = 7.1 Identities = 9/34 (26%), Positives = 20/34 (58%) Frame = +3 Query: 354 SFLMELRSKMPDQPQAGSTPTTTFGQRNNIPDHQ 455 SF+ ++ + P +PQ + PT+ + ++ DH+ Sbjct: 240 SFVRKVHATKPPKPQTKTKPTSPY----HVSDHK 269 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 21.8 bits (44), Expect = 7.1 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +3 Query: 462 YEDNLPSPQPPVYSS 506 Y + LP PQ P++S+ Sbjct: 301 YSNGLPFPQRPIWSN 315 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 21.8 bits (44), Expect = 7.1 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +3 Query: 462 YEDNLPSPQPPVYSS 506 Y + LP PQ P++S+ Sbjct: 301 YSNGLPFPQRPIWSN 315 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 21.8 bits (44), Expect = 7.1 Identities = 10/43 (23%), Positives = 17/43 (39%) Frame = +3 Query: 441 IPDHQPYYEDNLPSPQPPVYSSPTATTRNPR*YRATTRVRRIY 569 I H YY+ + PP Y+ R +++ V +Y Sbjct: 523 ISPHHEYYDSKSSTETPPSYNQLNYNENIERFFKSKPPVATMY 565 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 208,898 Number of Sequences: 438 Number of extensions: 4980 Number of successful extensions: 15 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23510295 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -