Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0839
         (664 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885...    29   2.5  
01_06_0115 + 26585481-26586401,26586501-26586556,26586747-265868...    28   7.6  

>05_07_0328 +
           29286109-29286120,29286982-29287146,29288427-29288589,
           29288625-29288903,29289047-29289122,29289725-29289787,
           29292116-29292164,29292413-29292504,29293017-29293068,
           29293209-29293271,29293382-29293431,29293941-29294016,
           29294444-29294656,29294763-29294869,29294966-29295074,
           29295489-29295689,29295773-29296033,29296154-29296171,
           29296287-29296397,29296755-29297030,29297108-29297382,
           29297814-29298165,29298371-29298655,29298715-29299261,
           29301658-29301781,29301871-29301946,29302062-29302136,
           29302300-29302353,29302833-29302892,29302977-29303093,
           29303228-29303361,29303480-29303682,29303879-29303976,
           29304358-29304461,29304537-29304702,29304803-29304925,
           29305047-29305129,29305217-29305358,29305523-29305549,
           29305784-29305854,29305930-29306518
          Length = 2046

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 431 GSKVAVLKELGEVDKDRPNNRINDGKQ 511
           G KVA  K+L   DKDRP+++ N  +Q
Sbjct: 8   GGKVAEPKDLAATDKDRPSSKKNRRRQ 34


>01_06_0115 +
           26585481-26586401,26586501-26586556,26586747-26586876,
           26587396-26587506,26587606-26587674,26588125-26588198,
           26588446-26588581,26588702-26588795,26588901-26589000,
           26589100-26589224,26589597-26589634,26589662-26589742,
           26589868-26589972,26590102-26590166,26590371-26590572,
           26591073-26591159,26591238-26591294,26591369-26591458,
           26591572-26591658,26592204-26592278,26592363-26592463,
           26592565-26592655
          Length = 964

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 354 GNMKPTLPSKLVFVCFSVVGTYL 286
           G  K + P K+  +CF + GTYL
Sbjct: 427 GRWKSSKPDKVAVICFGMEGTYL 449


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,011,109
Number of Sequences: 37544
Number of extensions: 364503
Number of successful extensions: 838
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)