BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0839 (664 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_33320| Best HMM Match : p450 (HMM E-Value=0) 31 0.84 SB_955| Best HMM Match : p450 (HMM E-Value=0) 31 0.84 SB_49169| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_49167| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_5014| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-07) 30 1.9 SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9 SB_15766| Best HMM Match : Cor1 (HMM E-Value=5.2) 28 7.8 >SB_33320| Best HMM Match : p450 (HMM E-Value=0) Length = 401 Score = 31.1 bits (67), Expect = 0.84 Identities = 18/59 (30%), Positives = 25/59 (42%) Frame = -2 Query: 378 NWSVVPSTGNMKPTLPSKLVFVCFSVVGTYLCIVLSWMLTKLALAXVHPSGALPPVLGA 202 N +V S GN P + V ++ L + LSWML K G PP++ A Sbjct: 315 NGELVTSQGNWLPFSAGRRVCSGEALAKAELFLFLSWMLQKFHFVPEEGEGQTPPIIKA 373 >SB_955| Best HMM Match : p450 (HMM E-Value=0) Length = 514 Score = 31.1 bits (67), Expect = 0.84 Identities = 18/59 (30%), Positives = 25/59 (42%) Frame = -2 Query: 378 NWSVVPSTGNMKPTLPSKLVFVCFSVVGTYLCIVLSWMLTKLALAXVHPSGALPPVLGA 202 N +V S GN P + V ++ L + LSWML K G PP++ A Sbjct: 428 NGELVTSQGNWLPFSAGRRVCSGEALAKAELFLFLSWMLQKFHFVPEEGEGKAPPIIKA 486 >SB_49169| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 259 Score = 30.7 bits (66), Expect = 1.1 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +1 Query: 520 GRLFAGTMGHEDPPGNFERNKASLYKLGSAK 612 G L +GHE+ PG E+ KA+L ++G+ + Sbjct: 36 GSLEDEVLGHEEDPGMMEKKKAALKRMGARR 66 >SB_49167| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 290 Score = 30.7 bits (66), Expect = 1.1 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +1 Query: 520 GRLFAGTMGHEDPPGNFERNKASLYKLGSAK 612 G L +GHE+ PG E+ KA+L ++G+ + Sbjct: 36 GSLEDEVLGHEEDPGMMEKKKAALKRMGARR 66 >SB_5014| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-07) Length = 194 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Frame = +1 Query: 307 KTYKNQFRWE----GWFHITSGRYNRPICSGSRTQVPFHT 414 K Y F W G FHI S I + +RT++PFHT Sbjct: 82 KKYYPYFEWPPFCYGLFHILSADVVPEILNHTRTRIPFHT 121 >SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1044 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Frame = +1 Query: 307 KTYKNQFRWE----GWFHITSGRYNRPICSGSRTQVPFHT 414 K Y F W G FHI S I + +RT++PFHT Sbjct: 932 KKYYPYFEWPPFCYGLFHILSADVVPEILNHTRTRIPFHT 971 >SB_15766| Best HMM Match : Cor1 (HMM E-Value=5.2) Length = 249 Score = 27.9 bits (59), Expect = 7.8 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = +2 Query: 356 VEGTTDQFVVGVERKFLF--IQWDGEDGSKVAVLKELGEVDKDRPN 487 V+G T V+G E + ++ WDG+ VLK+ GE + R N Sbjct: 47 VQGATLLTVIGEEAQDVYSTFNWDGDINKIEPVLKKFGEYCEPRRN 92 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,574,558 Number of Sequences: 59808 Number of extensions: 434064 Number of successful extensions: 852 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 801 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 852 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1705624125 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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