Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0839
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D31815-1|BAA06602.1| 299|Homo sapiens SMP-30 protein. 38 0.032
BC073173-1|AAH73173.1| 299|Homo sapiens regucalcin (senescence ... 38 0.032
AL513366-1|CAI41697.1| 299|Homo sapiens regucalcin (senescence ... 38 0.032
AK223360-1|BAD97080.1| 299|Homo sapiens regucalcin variant prot... 38 0.032
AB032064-1|BAA84082.1| 299|Homo sapiens regucalcin protein. 38 0.032
AB028125-1|BAA78693.1| 299|Homo sapiens regucalcin protein. 38 0.032
BC050371-1|AAH50371.1| 227|Homo sapiens RGN protein protein. 34 0.52
CR749405-1|CAH18249.1| 313|Homo sapiens hypothetical protein pr... 32 1.6
>D31815-1|BAA06602.1| 299|Homo sapiens SMP-30 protein.
Length = 299
Score = 37.9 bits (84), Expect = 0.032
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600
+ DP GR FAGTM E P ER++ +LY L
Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137
Score = 33.9 bits (74), Expect = 0.52
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436
FV I K + ++ T++ + ++D V + + + +V + KF + W +
Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86
Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508
AV+ L VD D+ NNR NDGK
Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106
>BC073173-1|AAH73173.1| 299|Homo sapiens regucalcin (senescence
marker protein-30) protein.
Length = 299
Score = 37.9 bits (84), Expect = 0.032
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600
+ DP GR FAGTM E P ER++ +LY L
Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137
Score = 33.9 bits (74), Expect = 0.52
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436
FV I K + ++ T++ + ++D V + + + +V + KF + W +
Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86
Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508
AV+ L VD D+ NNR NDGK
Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106
>AL513366-1|CAI41697.1| 299|Homo sapiens regucalcin (senescence
marker protein-30) protein.
Length = 299
Score = 37.9 bits (84), Expect = 0.032
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600
+ DP GR FAGTM E P ER++ +LY L
Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137
Score = 33.9 bits (74), Expect = 0.52
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436
FV I K + ++ T++ + ++D V + + + +V + KF + W +
Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86
Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508
AV+ L VD D+ NNR NDGK
Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106
>AK223360-1|BAD97080.1| 299|Homo sapiens regucalcin variant
protein.
Length = 299
Score = 37.9 bits (84), Expect = 0.032
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600
+ DP GR FAGTM E P ER++ +LY L
Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137
Score = 33.9 bits (74), Expect = 0.52
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436
FV I K + ++ T++ + ++D V + + + +V + KF + W +
Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86
Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508
AV+ L VD D+ NNR NDGK
Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106
>AB032064-1|BAA84082.1| 299|Homo sapiens regucalcin protein.
Length = 299
Score = 37.9 bits (84), Expect = 0.032
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600
+ DP GR FAGTM E P ER++ +LY L
Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137
Score = 33.9 bits (74), Expect = 0.52
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436
FV I K + ++ T++ + ++D V + + + +V + KF + W +
Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86
Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508
AV+ L VD D+ NNR NDGK
Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106
>AB028125-1|BAA78693.1| 299|Homo sapiens regucalcin protein.
Length = 299
Score = 37.9 bits (84), Expect = 0.032
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600
+ DP GR FAGTM E P ER++ +LY L
Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137
Score = 33.9 bits (74), Expect = 0.52
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436
FV I K + ++ T++ + ++D V + + + +V + KF + W +
Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86
Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508
AV+ L VD D+ NNR NDGK
Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106
>BC050371-1|AAH50371.1| 227|Homo sapiens RGN protein protein.
Length = 227
Score = 33.9 bits (74), Expect = 0.52
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436
FV I K + ++ T++ + ++D V + + + +V + KF + W +
Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86
Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508
AV+ L VD D+ NNR NDGK
Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106
>CR749405-1|CAH18249.1| 313|Homo sapiens hypothetical protein
protein.
Length = 313
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/70 (32%), Positives = 29/70 (41%)
Frame = +2
Query: 287 KYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGE 466
K V T K K L GF E +E + +F + G + KELG+
Sbjct: 158 KAVTTKIKTDKRDLIKLKGFCTAKETINRTNRQPIEWEKIFTNYASNKGLISRIYKELGQ 217
Query: 467 VDKDRPNNRI 496
DK RPNN I
Sbjct: 218 SDKQRPNNPI 227
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,356,083
Number of Sequences: 237096
Number of extensions: 2163819
Number of successful extensions: 3794
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3794
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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