BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0839 (664 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D31815-1|BAA06602.1| 299|Homo sapiens SMP-30 protein. 38 0.032 BC073173-1|AAH73173.1| 299|Homo sapiens regucalcin (senescence ... 38 0.032 AL513366-1|CAI41697.1| 299|Homo sapiens regucalcin (senescence ... 38 0.032 AK223360-1|BAD97080.1| 299|Homo sapiens regucalcin variant prot... 38 0.032 AB032064-1|BAA84082.1| 299|Homo sapiens regucalcin protein. 38 0.032 AB028125-1|BAA78693.1| 299|Homo sapiens regucalcin protein. 38 0.032 BC050371-1|AAH50371.1| 227|Homo sapiens RGN protein protein. 34 0.52 CR749405-1|CAH18249.1| 313|Homo sapiens hypothetical protein pr... 32 1.6 >D31815-1|BAA06602.1| 299|Homo sapiens SMP-30 protein. Length = 299 Score = 37.9 bits (84), Expect = 0.032 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +1 Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600 + DP GR FAGTM E P ER++ +LY L Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137 Score = 33.9 bits (74), Expect = 0.52 Identities = 24/84 (28%), Positives = 41/84 (48%) Frame = +2 Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436 FV I K + ++ T++ + ++D V + + + +V + KF + W + Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86 Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508 AV+ L VD D+ NNR NDGK Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106 >BC073173-1|AAH73173.1| 299|Homo sapiens regucalcin (senescence marker protein-30) protein. Length = 299 Score = 37.9 bits (84), Expect = 0.032 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +1 Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600 + DP GR FAGTM E P ER++ +LY L Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137 Score = 33.9 bits (74), Expect = 0.52 Identities = 24/84 (28%), Positives = 41/84 (48%) Frame = +2 Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436 FV I K + ++ T++ + ++D V + + + +V + KF + W + Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86 Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508 AV+ L VD D+ NNR NDGK Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106 >AL513366-1|CAI41697.1| 299|Homo sapiens regucalcin (senescence marker protein-30) protein. Length = 299 Score = 37.9 bits (84), Expect = 0.032 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +1 Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600 + DP GR FAGTM E P ER++ +LY L Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137 Score = 33.9 bits (74), Expect = 0.52 Identities = 24/84 (28%), Positives = 41/84 (48%) Frame = +2 Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436 FV I K + ++ T++ + ++D V + + + +V + KF + W + Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86 Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508 AV+ L VD D+ NNR NDGK Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106 >AK223360-1|BAD97080.1| 299|Homo sapiens regucalcin variant protein. Length = 299 Score = 37.9 bits (84), Expect = 0.032 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +1 Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600 + DP GR FAGTM E P ER++ +LY L Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137 Score = 33.9 bits (74), Expect = 0.52 Identities = 24/84 (28%), Positives = 41/84 (48%) Frame = +2 Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436 FV I K + ++ T++ + ++D V + + + +V + KF + W + Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86 Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508 AV+ L VD D+ NNR NDGK Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106 >AB032064-1|BAA84082.1| 299|Homo sapiens regucalcin protein. Length = 299 Score = 37.9 bits (84), Expect = 0.032 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +1 Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600 + DP GR FAGTM E P ER++ +LY L Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137 Score = 33.9 bits (74), Expect = 0.52 Identities = 24/84 (28%), Positives = 41/84 (48%) Frame = +2 Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436 FV I K + ++ T++ + ++D V + + + +V + KF + W + Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86 Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508 AV+ L VD D+ NNR NDGK Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106 >AB028125-1|BAA78693.1| 299|Homo sapiens regucalcin protein. Length = 299 Score = 37.9 bits (84), Expect = 0.032 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +1 Query: 505 QTDPRGRLFAGTMGHEDPPGNFERNKASLYKL 600 + DP GR FAGTM E P ER++ +LY L Sbjct: 106 KVDPAGRYFAGTMAEETAPAVLERHQGALYSL 137 Score = 33.9 bits (74), Expect = 0.52 Identities = 24/84 (28%), Positives = 41/84 (48%) Frame = +2 Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436 FV I K + ++ T++ + ++D V + + + +V + KF + W + Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86 Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508 AV+ L VD D+ NNR NDGK Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106 >BC050371-1|AAH50371.1| 227|Homo sapiens RGN protein protein. Length = 227 Score = 33.9 bits (74), Expect = 0.52 Identities = 24/84 (28%), Positives = 41/84 (48%) Frame = +2 Query: 257 FVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGS 436 FV I K + ++ T++ + ++D V + + + +V + KF + W + Sbjct: 31 FVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQ--SGGYVATIGTKFCALNWKEQS-- 86 Query: 437 KVAVLKELGEVDKDRPNNRINDGK 508 AV+ L VD D+ NNR NDGK Sbjct: 87 --AVV--LATVDNDKKNNRFNDGK 106 >CR749405-1|CAH18249.1| 313|Homo sapiens hypothetical protein protein. Length = 313 Score = 32.3 bits (70), Expect = 1.6 Identities = 23/70 (32%), Positives = 29/70 (41%) Frame = +2 Query: 287 KYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGE 466 K V T K K L GF E +E + +F + G + KELG+ Sbjct: 158 KAVTTKIKTDKRDLIKLKGFCTAKETINRTNRQPIEWEKIFTNYASNKGLISRIYKELGQ 217 Query: 467 VDKDRPNNRI 496 DK RPNN I Sbjct: 218 SDKQRPNNPI 227 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 95,356,083 Number of Sequences: 237096 Number of extensions: 2163819 Number of successful extensions: 3794 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3647 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3794 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 7478817430 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -