Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0839
         (664 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1736|AAN09306.2|  319|Drosophila melanogaster CG1803-PD...    57   2e-08
AY118643-1|AAM50012.1|  303|Drosophila melanogaster SD03837p pro...    57   2e-08
AE014298-1739|AAF48130.1|  303|Drosophila melanogaster CG1803-PC...    57   2e-08
AE014298-1738|AAF48128.1|  303|Drosophila melanogaster CG1803-PB...    57   2e-08
AE014298-1737|AAF48129.1|  303|Drosophila melanogaster CG1803-PA...    57   2e-08
AB036904-1|BAA99283.1|  303|Drosophila melanogaster regucalcin h...    57   2e-08
AB029490-1|BAA92938.1|  303|Drosophila melanogaster senescence m...    54   2e-07
AY071130-1|AAL48752.1|  303|Drosophila melanogaster RE17477p pro...    52   5e-07
AE014297-1895|AAN13618.1|  303|Drosophila melanogaster CG7390-PB...    52   5e-07
AE014297-1894|AAF55095.1|  303|Drosophila melanogaster CG7390-PA...    52   5e-07
AE014297-3371|AAS65197.1|  284|Drosophila melanogaster CG10365-P...    30   3.2  
AE014297-3370|AAF56172.1|  284|Drosophila melanogaster CG10365-P...    30   3.2  
AE014297-3369|AAF56171.1|  284|Drosophila melanogaster CG10365-P...    30   3.2  
AE014297-3368|AAF56170.1|  284|Drosophila melanogaster CG10365-P...    30   3.2  

>AE014298-1736|AAN09306.2|  319|Drosophila melanogaster CG1803-PD,
           isoform D protein.
          Length = 319

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
 Frame = +2

Query: 137 LITLCLVKKPYTMSVRIEKNHGAPNTGGRAP-LG*TXASANFVSIQDKTIHKYVPTTEKH 313
           +I +CL     TMS ++E    +    G  P       S  +V ++  ++ +Y     K 
Sbjct: 7   VIAVCLFG--LTMSYKVEPLPDSYAGLGEGPHWDVARQSLYYVDLEAGSLLRYDYAQNKV 64

Query: 314 TKTSLDGRV--GFILPVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPN 487
            KT ++G    GF+LPVEG   +F VG  R+ + + WDG   S   V++ L EV      
Sbjct: 65  YKTKIEGETLAGFVLPVEGRPQEFAVGCGRRVVIVNWDGVSPS-AKVVRTLFEVQPLMEK 123

Query: 488 NRINDGK 508
           NR+ND K
Sbjct: 124 NRLNDAK 130


>AY118643-1|AAM50012.1|  303|Drosophila melanogaster SD03837p
           protein.
          Length = 303

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = +2

Query: 248 SANFVSIQDKTIHKYVPTTEKHTKTSLDGRV--GFILPVEGTTDQFVVGVERKFLFIQWD 421
           S  +V ++  ++ +Y     K  KT ++G    GF+LPVEG   +F VG  R+ + + WD
Sbjct: 27  SLYYVDLEAGSLLRYDYAQNKVYKTKIEGETLAGFVLPVEGRPQEFAVGCGRRVVIVNWD 86

Query: 422 GEDGSKVAVLKELGEVDKDRPNNRINDGK 508
           G   S   V++ L EV      NR+ND K
Sbjct: 87  GVSPS-AKVVRTLFEVQPLMEKNRLNDAK 114



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 213 LGEGPHWDERKQAL 254
           LGEGPHWD  +Q+L
Sbjct: 15  LGEGPHWDVARQSL 28


>AE014298-1739|AAF48130.1|  303|Drosophila melanogaster CG1803-PC,
           isoform C protein.
          Length = 303

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = +2

Query: 248 SANFVSIQDKTIHKYVPTTEKHTKTSLDGRV--GFILPVEGTTDQFVVGVERKFLFIQWD 421
           S  +V ++  ++ +Y     K  KT ++G    GF+LPVEG   +F VG  R+ + + WD
Sbjct: 27  SLYYVDLEAGSLLRYDYAQNKVYKTKIEGETLAGFVLPVEGRPQEFAVGCGRRVVIVNWD 86

Query: 422 GEDGSKVAVLKELGEVDKDRPNNRINDGK 508
           G   S   V++ L EV      NR+ND K
Sbjct: 87  GVSPS-AKVVRTLFEVQPLMEKNRLNDAK 114



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 213 LGEGPHWDERKQAL 254
           LGEGPHWD  +Q+L
Sbjct: 15  LGEGPHWDVARQSL 28


>AE014298-1738|AAF48128.1|  303|Drosophila melanogaster CG1803-PB,
           isoform B protein.
          Length = 303

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = +2

Query: 248 SANFVSIQDKTIHKYVPTTEKHTKTSLDGRV--GFILPVEGTTDQFVVGVERKFLFIQWD 421
           S  +V ++  ++ +Y     K  KT ++G    GF+LPVEG   +F VG  R+ + + WD
Sbjct: 27  SLYYVDLEAGSLLRYDYAQNKVYKTKIEGETLAGFVLPVEGRPQEFAVGCGRRVVIVNWD 86

Query: 422 GEDGSKVAVLKELGEVDKDRPNNRINDGK 508
           G   S   V++ L EV      NR+ND K
Sbjct: 87  GVSPS-AKVVRTLFEVQPLMEKNRLNDAK 114



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 213 LGEGPHWDERKQAL 254
           LGEGPHWD  +Q+L
Sbjct: 15  LGEGPHWDVARQSL 28


>AE014298-1737|AAF48129.1|  303|Drosophila melanogaster CG1803-PA,
           isoform A protein.
          Length = 303

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = +2

Query: 248 SANFVSIQDKTIHKYVPTTEKHTKTSLDGRV--GFILPVEGTTDQFVVGVERKFLFIQWD 421
           S  +V ++  ++ +Y     K  KT ++G    GF+LPVEG   +F VG  R+ + + WD
Sbjct: 27  SLYYVDLEAGSLLRYDYAQNKVYKTKIEGETLAGFVLPVEGRPQEFAVGCGRRVVIVNWD 86

Query: 422 GEDGSKVAVLKELGEVDKDRPNNRINDGK 508
           G   S   V++ L EV      NR+ND K
Sbjct: 87  GVSPS-AKVVRTLFEVQPLMEKNRLNDAK 114



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 213 LGEGPHWDERKQAL 254
           LGEGPHWD  +Q+L
Sbjct: 15  LGEGPHWDVARQSL 28


>AB036904-1|BAA99283.1|  303|Drosophila melanogaster regucalcin
           homologue protein.
          Length = 303

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = +2

Query: 248 SANFVSIQDKTIHKYVPTTEKHTKTSLDGRV--GFILPVEGTTDQFVVGVERKFLFIQWD 421
           S  +V ++  ++ +Y     K  KT ++G    GF+LPVEG   +F VG  R+ + + WD
Sbjct: 27  SLYYVDLEAGSLLRYDYAQNKVYKTKIEGETLAGFVLPVEGRPQEFAVGCGRRVVIVNWD 86

Query: 422 GEDGSKVAVLKELGEVDKDRPNNRINDGK 508
           G   S   V++ L EV      NR+ND K
Sbjct: 87  GVSPS-AKVVRTLFEVQPLMEKNRLNDAK 114



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 213 LGEGPHWDERKQAL 254
           LGEGPHWD  +Q+L
Sbjct: 15  LGEGPHWDVARQSL 28


>AB029490-1|BAA92938.1|  303|Drosophila melanogaster senescence
           marker protein-30 (SMP-30) protein.
          Length = 303

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +2

Query: 248 SANFVSIQDKTIHKYVPTTEKHTKTSLDGRV--GFILPVEGTTDQFVVGVERKFLFIQWD 421
           S  +V ++   I++Y     K  K  ++G +   FILPVE    +F VG   + + +QWD
Sbjct: 27  SLYYVDLESAGINRYDFKQNKVYKAKIEGEIFASFILPVENKPQEFAVGCGLRTVIVQWD 86

Query: 422 GEDGSKVAVLKELGEVDKDRPNNRINDGK 508
           G   +   V + L EV  D   NR+ND K
Sbjct: 87  GV-SAVAKVTRTLFEVQPDLKENRLNDAK 114



 Score = 28.7 bits (61), Expect = 7.5
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 213 LGEGPHWDERKQAL 254
           LGEGPHWD  +Q+L
Sbjct: 15  LGEGPHWDVDRQSL 28


>AY071130-1|AAL48752.1|  303|Drosophila melanogaster RE17477p
           protein.
          Length = 303

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +2

Query: 248 SANFVSIQDKTIHKYVPTTEKHTKTSLDGRV--GFILPVEGTTDQFVVGVERKFLFIQWD 421
           S  +V ++   I++Y     K  +  ++G +   FILPVE    +F VG   + + +QWD
Sbjct: 27  SLYYVDLESAGINRYDFKQNKVYRAKIEGEIFASFILPVENKPQEFAVGCGLRTVIVQWD 86

Query: 422 GEDGSKVAVLKELGEVDKDRPNNRINDGK 508
           G   +   V + L EV  D   NR+ND K
Sbjct: 87  GV-SAVAKVTRTLFEVQPDLKENRLNDAK 114



 Score = 28.7 bits (61), Expect = 7.5
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 213 LGEGPHWDERKQAL 254
           LGEGPHWD  +Q+L
Sbjct: 15  LGEGPHWDVDRQSL 28


>AE014297-1895|AAN13618.1|  303|Drosophila melanogaster CG7390-PB,
           isoform B protein.
          Length = 303

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +2

Query: 248 SANFVSIQDKTIHKYVPTTEKHTKTSLDGRV--GFILPVEGTTDQFVVGVERKFLFIQWD 421
           S  +V ++   I++Y     K  +  ++G +   FILPVE    +F VG   + + +QWD
Sbjct: 27  SLYYVDLESAGINRYDFKQNKVYRAKIEGEIFASFILPVENKPQEFAVGCGLRTVIVQWD 86

Query: 422 GEDGSKVAVLKELGEVDKDRPNNRINDGK 508
           G   +   V + L EV  D   NR+ND K
Sbjct: 87  GV-SAVAKVTRTLFEVQPDLKENRLNDAK 114



 Score = 28.7 bits (61), Expect = 7.5
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 213 LGEGPHWDERKQAL 254
           LGEGPHWD  +Q+L
Sbjct: 15  LGEGPHWDVDRQSL 28


>AE014297-1894|AAF55095.1|  303|Drosophila melanogaster CG7390-PA,
           isoform A protein.
          Length = 303

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +2

Query: 248 SANFVSIQDKTIHKYVPTTEKHTKTSLDGRV--GFILPVEGTTDQFVVGVERKFLFIQWD 421
           S  +V ++   I++Y     K  +  ++G +   FILPVE    +F VG   + + +QWD
Sbjct: 27  SLYYVDLESAGINRYDFKQNKVYRAKIEGEIFASFILPVENKPQEFAVGCGLRTVIVQWD 86

Query: 422 GEDGSKVAVLKELGEVDKDRPNNRINDGK 508
           G   +   V + L EV  D   NR+ND K
Sbjct: 87  GV-SAVAKVTRTLFEVQPDLKENRLNDAK 114



 Score = 28.7 bits (61), Expect = 7.5
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 213 LGEGPHWDERKQAL 254
           LGEGPHWD  +Q+L
Sbjct: 15  LGEGPHWDVDRQSL 28


>AE014297-3371|AAS65197.1|  284|Drosophila melanogaster CG10365-PD,
           isoform D protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 256 LCEHPR*NYTQICTNY*KTYKNQFRWEG 339
           LC HP  NYT+  T Y + Y  +F W+G
Sbjct: 65  LCWHPGFNYTKCITGYIRGYVRRF-WQG 91


>AE014297-3370|AAF56172.1|  284|Drosophila melanogaster CG10365-PC,
           isoform C protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 256 LCEHPR*NYTQICTNY*KTYKNQFRWEG 339
           LC HP  NYT+  T Y + Y  +F W+G
Sbjct: 65  LCWHPGFNYTKCITGYIRGYVRRF-WQG 91


>AE014297-3369|AAF56171.1|  284|Drosophila melanogaster CG10365-PB,
           isoform B protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 256 LCEHPR*NYTQICTNY*KTYKNQFRWEG 339
           LC HP  NYT+  T Y + Y  +F W+G
Sbjct: 65  LCWHPGFNYTKCITGYIRGYVRRF-WQG 91


>AE014297-3368|AAF56170.1|  284|Drosophila melanogaster CG10365-PA,
           isoform A protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 256 LCEHPR*NYTQICTNY*KTYKNQFRWEG 339
           LC HP  NYT+  T Y + Y  +F W+G
Sbjct: 65  LCWHPGFNYTKCITGYIRGYVRRF-WQG 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,288,247
Number of Sequences: 53049
Number of extensions: 607580
Number of successful extensions: 1338
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)