Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0837
         (721 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408...    30   1.6  
07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993     28   6.5  
11_06_0359 - 22683236-22683484,22684069-22684263,22684450-226847...    28   8.6  
09_04_0368 + 17005231-17005437,17005707-17005963,17006061-170061...    28   8.6  

>05_01_0490 +
           4083768-4083775,4083845-4084336,4084441-4084522,
           4086671-4087357,4087555-4087813,4088435-4088558,
           4089474-4089564
          Length = 580

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = -2

Query: 393 SSSGAKRIFNTHFLDSESERPDSLSETLNAFLTENCNYHYSNVSLLRISFRRNLCPSFFF 214
           S  G   +F+    D+E +     S T  A + +NCNY  S V + +     N   S  F
Sbjct: 449 SDKGTVHVFSLRVKDAEEDAKKGESATAGAQVNDNCNYG-STVPVTQTKIGSNTSSSLSF 507

Query: 213 RVYGLVSRTF 184
            + G++ + F
Sbjct: 508 -MKGILPKYF 516


>07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993
          Length = 678

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 348 SESERPDSLSETLNAFLTENCNYHYSNVSL 259
           S SE+P S+  T++A L +  N H S+V +
Sbjct: 545 SRSEKPASIGSTIDAVLLQEGNTHTSDVEM 574


>11_06_0359 -
           22683236-22683484,22684069-22684263,22684450-22684734,
           22686424-22686624,22688853-22689107,22689178-22689328,
           22689466-22689535,22690176-22690434,22691333-22691461
          Length = 597

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -3

Query: 398 RTVQVGPSEFLTLIFST 348
           RTVQ GPSEFLT I  T
Sbjct: 354 RTVQFGPSEFLTEISGT 370


>09_04_0368 +
           17005231-17005437,17005707-17005963,17006061-17006115,
           17006196-17006276,17006357-17006453,17006560-17006627,
           17006788-17006886,17007008-17007049,17007124-17007263,
           17007882-17008018,17008275-17008444
          Length = 450

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -3

Query: 206 MAWYLGPLGQLP-VFMGGCWVVRL*RSCIQLRKQRFTKTSTRSRYFKCTAVREGCPCV 36
           MAW+LGP  Q   V   G  V +     +QL   ++ + S +    +  + ++GC C+
Sbjct: 312 MAWFLGPAWQYQYVSKDGRAVFKDNAPILQLSNGKWLRLSAQQMDKRQMSQKDGCKCI 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,085,950
Number of Sequences: 37544
Number of extensions: 351110
Number of successful extensions: 710
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)