BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0837 (721 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 30 1.6 07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993 28 6.5 11_06_0359 - 22683236-22683484,22684069-22684263,22684450-226847... 28 8.6 09_04_0368 + 17005231-17005437,17005707-17005963,17006061-170061... 28 8.6 >05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522, 4086671-4087357,4087555-4087813,4088435-4088558, 4089474-4089564 Length = 580 Score = 30.3 bits (65), Expect = 1.6 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = -2 Query: 393 SSSGAKRIFNTHFLDSESERPDSLSETLNAFLTENCNYHYSNVSLLRISFRRNLCPSFFF 214 S G +F+ D+E + S T A + +NCNY S V + + N S F Sbjct: 449 SDKGTVHVFSLRVKDAEEDAKKGESATAGAQVNDNCNYG-STVPVTQTKIGSNTSSSLSF 507 Query: 213 RVYGLVSRTF 184 + G++ + F Sbjct: 508 -MKGILPKYF 516 >07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993 Length = 678 Score = 28.3 bits (60), Expect = 6.5 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -2 Query: 348 SESERPDSLSETLNAFLTENCNYHYSNVSL 259 S SE+P S+ T++A L + N H S+V + Sbjct: 545 SRSEKPASIGSTIDAVLLQEGNTHTSDVEM 574 >11_06_0359 - 22683236-22683484,22684069-22684263,22684450-22684734, 22686424-22686624,22688853-22689107,22689178-22689328, 22689466-22689535,22690176-22690434,22691333-22691461 Length = 597 Score = 27.9 bits (59), Expect = 8.6 Identities = 13/17 (76%), Positives = 13/17 (76%) Frame = -3 Query: 398 RTVQVGPSEFLTLIFST 348 RTVQ GPSEFLT I T Sbjct: 354 RTVQFGPSEFLTEISGT 370 >09_04_0368 + 17005231-17005437,17005707-17005963,17006061-17006115, 17006196-17006276,17006357-17006453,17006560-17006627, 17006788-17006886,17007008-17007049,17007124-17007263, 17007882-17008018,17008275-17008444 Length = 450 Score = 27.9 bits (59), Expect = 8.6 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -3 Query: 206 MAWYLGPLGQLP-VFMGGCWVVRL*RSCIQLRKQRFTKTSTRSRYFKCTAVREGCPCV 36 MAW+LGP Q V G V + +QL ++ + S + + + ++GC C+ Sbjct: 312 MAWFLGPAWQYQYVSKDGRAVFKDNAPILQLSNGKWLRLSAQQMDKRQMSQKDGCKCI 369 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,085,950 Number of Sequences: 37544 Number of extensions: 351110 Number of successful extensions: 710 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 699 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 710 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1874582652 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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