BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0837 (721 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0 SB_52396| Best HMM Match : DEAD (HMM E-Value=0.0023) 28 8.8 SB_49445| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8 SB_17931| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8 >SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1051 Score = 28.7 bits (61), Expect = 5.0 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = -2 Query: 156 LLGCQTLTLMHSIKETKIH*NINPFKVF*VYSGE 55 +LGC LT H K KI I KVF V SG+ Sbjct: 241 ILGCAQLTCKHKDKSLKIKCYIAKNKVFSVLSGQ 274 >SB_52396| Best HMM Match : DEAD (HMM E-Value=0.0023) Length = 191 Score = 27.9 bits (59), Expect = 8.8 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -2 Query: 417 PETFSLADSSSGAKRIFNTHFLDSESERPDSLSET 313 PE +SL D S A NT DSE E+P SL ++ Sbjct: 128 PEVYSLLDDSIDA----NTSNADSEDEKPRSLPQS 158 >SB_49445| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 150 Score = 27.9 bits (59), Expect = 8.8 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -2 Query: 417 PETFSLADSSSGAKRIFNTHFLDSESERPDSLSET 313 PE +SL D S A NT DSE E+P SL ++ Sbjct: 87 PEVYSLLDDSIDA----NTSNADSEDEKPRSLPQS 117 >SB_17931| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 85 Score = 27.9 bits (59), Expect = 8.8 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -2 Query: 417 PETFSLADSSSGAKRIFNTHFLDSESERPDSLSET 313 PE +SL D S A NT DSE E+P SL ++ Sbjct: 22 PEVYSLLDDSIDA----NTSNADSEDEKPRSLPQS 52 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,442,531 Number of Sequences: 59808 Number of extensions: 436224 Number of successful extensions: 1038 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 975 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1038 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1913853903 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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