Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0837
         (721 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.0  
SB_52396| Best HMM Match : DEAD (HMM E-Value=0.0023)                   28   8.8  
SB_49445| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.8  
SB_17931| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.8  

>SB_28310| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1051

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 156 LLGCQTLTLMHSIKETKIH*NINPFKVF*VYSGE 55
           +LGC  LT  H  K  KI   I   KVF V SG+
Sbjct: 241 ILGCAQLTCKHKDKSLKIKCYIAKNKVFSVLSGQ 274


>SB_52396| Best HMM Match : DEAD (HMM E-Value=0.0023)
          Length = 191

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 417 PETFSLADSSSGAKRIFNTHFLDSESERPDSLSET 313
           PE +SL D S  A    NT   DSE E+P SL ++
Sbjct: 128 PEVYSLLDDSIDA----NTSNADSEDEKPRSLPQS 158


>SB_49445| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 150

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 417 PETFSLADSSSGAKRIFNTHFLDSESERPDSLSET 313
           PE +SL D S  A    NT   DSE E+P SL ++
Sbjct: 87  PEVYSLLDDSIDA----NTSNADSEDEKPRSLPQS 117


>SB_17931| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 85

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 417 PETFSLADSSSGAKRIFNTHFLDSESERPDSLSET 313
           PE +SL D S  A    NT   DSE E+P SL ++
Sbjct: 22  PEVYSLLDDSIDA----NTSNADSEDEKPRSLPQS 52


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,442,531
Number of Sequences: 59808
Number of extensions: 436224
Number of successful extensions: 1038
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)