Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0837
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.95 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.95 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.2  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   3.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.9  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
 Frame = +1

Query: 532  AIKEIKHMS----DSIISNSCYAQITMVPFVLLFNLVILKLTPKSGNL 663
            A+KE K M+    D+  S   +   T +PFV  FN  ++KLT  SG +
Sbjct: 907  AVKEGKFMNVNMLDTYESVHSFPTETGLPFVYTFN--VIKLTKTSGTV 952


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 139 SLTTQQPPIKTGSWPKGPRYQAINSKKKRR 228
           S   Q+P  KT  W KG R +   SKK RR
Sbjct: 414 SYDAQEPAWKTHVWKKG-RDKKSTSKKPRR 442


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 416 QRPFH*RTVQVGPSEFLTLIFSTANLRDRIRS 321
           Q P+   T+Q+ P E LTL   T+N  +  +S
Sbjct: 462 QFPYVHDTLQIQPQEQLTLSKVTSNYHEEFQS 493


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +1

Query: 535 IKEIKHMSDSIISNSCYAQITMVPFVLLFNLVILKLTPKSGN 660
           I  +K     I++    A I+ +PF +   + +++  P+SGN
Sbjct: 152 ISGLKRPIRFILAAWLIALISAIPFAIYTKVNLVEYPPESGN 193


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 605 GTIVICA*QLLDIIESDMCLISLIALKE 522
           GT+  C   L    E D CL++  ALK+
Sbjct: 433 GTLQRCLLSLEKTYERDTCLLASDALKQ 460


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 605 GTIVICA*QLLDIIESDMCLISLIALKE 522
           GT+  C   L    E D CL++  ALK+
Sbjct: 471 GTLQRCLLSLEKTYERDTCLLASDALKQ 498


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 574 NSCYAQITMVPFVLLFNLVILKLTPKSGNLFS*KKLTKRS 693
           N C   I   P  L   +   KL  ++  LFS ++ TK +
Sbjct: 485 NECLLNIQKSPRTLTLGIFAEKLRLETKELFSSQQKTKNN 524


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,783
Number of Sequences: 438
Number of extensions: 3845
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)