BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0836 (637 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0942 + 7957776-7958004,7958113-7958708 29 3.1 06_01_0834 - 6306469-6306519,6306754-6306857,6307069-6307126,630... 28 5.4 05_05_0147 + 22715144-22715444,22716245-22716407,22716484-227165... 28 7.1 01_06_1258 + 35806557-35806932,35807517-35807679,35807789-358078... 28 7.1 >07_01_0942 + 7957776-7958004,7958113-7958708 Length = 274 Score = 29.1 bits (62), Expect = 3.1 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 40 CAFSLALQALNGTPQFFRACSRLHRIIRRCHVKNVTKNTSNCG 168 C+F+L G Q+ C R+ R+++ C V + N N G Sbjct: 180 CSFALGRTVSTGGDQYKLLCIRMDRVLQVCSVLTLGGNGINSG 222 >06_01_0834 - 6306469-6306519,6306754-6306857,6307069-6307126, 6308533-6308560,6309028-6309080 Length = 97 Score = 28.3 bits (60), Expect = 5.4 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 424 VKL*FSKNIIGLDYHFFRLEFNVSK 498 +KL FS+ +IG++Y F FN+SK Sbjct: 64 LKLSFSEILIGVEYEFIEDRFNLSK 88 >05_05_0147 + 22715144-22715444,22716245-22716407,22716484-22716532, 22716626-22716739,22716812-22717234,22717307-22717693, 22717777-22717872,22717978-22718093,22718137-22718272, 22718392-22718480,22718586-22718736,22719057-22719185, 22719276-22719354,22719435-22719544 Length = 780 Score = 27.9 bits (59), Expect = 7.1 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -3 Query: 314 FTPTNTDN*YFKILIRMGYMLHHIEG*KAIWYKRHL 207 F+ T + + + ++++ LHH+ G A WY HL Sbjct: 419 FSFTLATHSFRRSVVKLPSPLHHLAGFNAFWYAHHL 454 >01_06_1258 + 35806557-35806932,35807517-35807679,35807789-35807837, 35807943-35808866,35808954-35809049,35809142-35809257, 35809345-35809447,35809570-35809658,35809750-35809900, 35809995-35810141,35810238-35810366,35810451-35810529, 35810616-35810725 Length = 843 Score = 27.9 bits (59), Expect = 7.1 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -3 Query: 314 FTPTNTDN*YFKILIRMGYMLHHIEG*KAIWYKRHL 207 F+ T + + + ++++ LHH+ G A WY HL Sbjct: 444 FSFTLATHSFRRSVVKLPSPLHHLAGFNAFWYAHHL 479 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,291,212 Number of Sequences: 37544 Number of extensions: 284073 Number of successful extensions: 475 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 467 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 475 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1561213104 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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