Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0836
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0942 + 7957776-7958004,7958113-7958708                           29   3.1  
06_01_0834 - 6306469-6306519,6306754-6306857,6307069-6307126,630...    28   5.4  
05_05_0147 + 22715144-22715444,22716245-22716407,22716484-227165...    28   7.1  
01_06_1258 + 35806557-35806932,35807517-35807679,35807789-358078...    28   7.1  

>07_01_0942 + 7957776-7958004,7958113-7958708
          Length = 274

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 40  CAFSLALQALNGTPQFFRACSRLHRIIRRCHVKNVTKNTSNCG 168
           C+F+L      G  Q+   C R+ R+++ C V  +  N  N G
Sbjct: 180 CSFALGRTVSTGGDQYKLLCIRMDRVLQVCSVLTLGGNGINSG 222


>06_01_0834 -
           6306469-6306519,6306754-6306857,6307069-6307126,
           6308533-6308560,6309028-6309080
          Length = 97

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 424 VKL*FSKNIIGLDYHFFRLEFNVSK 498
           +KL FS+ +IG++Y F    FN+SK
Sbjct: 64  LKLSFSEILIGVEYEFIEDRFNLSK 88


>05_05_0147 +
           22715144-22715444,22716245-22716407,22716484-22716532,
           22716626-22716739,22716812-22717234,22717307-22717693,
           22717777-22717872,22717978-22718093,22718137-22718272,
           22718392-22718480,22718586-22718736,22719057-22719185,
           22719276-22719354,22719435-22719544
          Length = 780

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 314 FTPTNTDN*YFKILIRMGYMLHHIEG*KAIWYKRHL 207
           F+ T   + + + ++++   LHH+ G  A WY  HL
Sbjct: 419 FSFTLATHSFRRSVVKLPSPLHHLAGFNAFWYAHHL 454


>01_06_1258 +
           35806557-35806932,35807517-35807679,35807789-35807837,
           35807943-35808866,35808954-35809049,35809142-35809257,
           35809345-35809447,35809570-35809658,35809750-35809900,
           35809995-35810141,35810238-35810366,35810451-35810529,
           35810616-35810725
          Length = 843

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 314 FTPTNTDN*YFKILIRMGYMLHHIEG*KAIWYKRHL 207
           F+ T   + + + ++++   LHH+ G  A WY  HL
Sbjct: 444 FSFTLATHSFRRSVVKLPSPLHHLAGFNAFWYAHHL 479


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,291,212
Number of Sequences: 37544
Number of extensions: 284073
Number of successful extensions: 475
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)