Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0834
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    27   0.17 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.6  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +2

Query: 383 IWKISNHTLEIQTMLEKIIL--YSVKLRAVIYIVITVIYSPKLSQGKNLTKSQLSQHCGK 556
           I+   N T+ I   +   +L  ++V LR ++      +     +QG  L+K ++   C K
Sbjct: 51  IYGSMNMTVAITDKIANFMLTFFNVSLRIILVFSKGKVIKSFFNQGYELSKQEIFNCCSK 110

Query: 557 HK*YKYNSVIFY*FM 601
            K ++ N  IF  +M
Sbjct: 111 -KSFRMNFAIFNLYM 124


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 121 VXEKCSKGQKRVPCATSWEDF*N 189
           V E CS+G  +    T+W+ F N
Sbjct: 531 VVEYCSRGDLQTYLRTAWDKFTN 553


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 198 STXVSEVFPGGRT 160
           S   SE FPGGRT
Sbjct: 10  SPSASEAFPGGRT 22


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 48  MLFTILHRCNNLTV 7
           MLFTIL  C N  V
Sbjct: 283 MLFTILWNCQNTRV 296


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 370 KCWLDLEDFKSHFRNTDNVRK 432
           +C+   E F  +FRN+D + K
Sbjct: 703 RCYKMQEQFTLNFRNSDELIK 723


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,904
Number of Sequences: 336
Number of extensions: 2439
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)