BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0834 (636 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_5008| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_43762| Best HMM Match : Pentaxin (HMM E-Value=1.4e-13) 28 5.5 SB_17612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5 SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 28 7.3 SB_29055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3 >SB_5008| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 406 Score = 30.3 bits (65), Expect = 1.4 Identities = 14/59 (23%), Positives = 32/59 (54%) Frame = +1 Query: 292 NDTLLXREATTYFMQYMETIGQHLLVKCWLDLEDFKSHFRNTDNVRKNNFVFSKTQSCD 468 +D + A YFM+++E G +++ WL ++F+S + + +N ++ +Q+ D Sbjct: 296 SDIMYNEHAVFYFMEFLEQEGVRHMLEFWLTADNFQSMLK----TKMDNGSYNASQALD 350 >SB_43762| Best HMM Match : Pentaxin (HMM E-Value=1.4e-13) Length = 207 Score = 28.3 bits (60), Expect = 5.5 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = +2 Query: 242 KDSEVFLKRNPSCRXH*MTLSLXEKQLRILCNTWKPSDNIY 364 KD E+F N + + +S + + +LC +W+ SD Y Sbjct: 62 KDQEIFFGVNNTIEFVDLGVSFRDDKWHMLCWSWRSSDGFY 102 >SB_17612| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 566 Score = 28.3 bits (60), Expect = 5.5 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +1 Query: 301 LLXREATTYFMQYMETIGQHLLVKCWLDLEDFKSHFRNTDNVRKNNFVFSKTQSCDL 471 L +E Y +++ T Q L KC D+E ++ + DN+ +F+ S +CD+ Sbjct: 305 LKTQEWDPYLCKFLVTSKQRLWDKCVSDVERQRTPIIDVDNLAL-DFISSNVANCDI 360 >SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) Length = 1724 Score = 27.9 bits (59), Expect = 7.3 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -3 Query: 172 RRSHRAPAFALCCTFXKLSHFVK 104 RR R AF LCC F L+H+VK Sbjct: 108 RRCMRTSAFGLCCRFI-LAHWVK 129 >SB_29055| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 232 Score = 27.9 bits (59), Expect = 7.3 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +2 Query: 188 TXVDFNNILSSTQFLHDIKDSEVFLK 265 T DFN S QF+ +K++ +FLK Sbjct: 66 TQADFNKCFESLQFMEGMKETCIFLK 91 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,250,243 Number of Sequences: 59808 Number of extensions: 276994 Number of successful extensions: 584 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 543 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 584 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1596754500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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