Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0833
         (791 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0307 + 2414709-2414762,2415769-2415841,2416090-2416154,241...    30   1.8  
05_01_0145 + 950312-950505,950998-951482,951532-951913,952127-95...    28   7.4  
07_03_1535 + 27531468-27531892,27531988-27532407,27533183-275333...    28   9.8  
04_04_0290 - 24174361-24174744,24175057-24175209,24175323-241755...    28   9.8  
03_06_0728 + 35768830-35769324,35769404-35769462,35770440-357705...    28   9.8  

>03_01_0307 +
           2414709-2414762,2415769-2415841,2416090-2416154,
           2416288-2416365,2416880-2416999,2418021-2418091,
           2418808-2418900,2419242-2419311,2420236-2420436,
           2421345-2421557,2422354-2422440,2422441-2422652,
           2422901-2423042,2423424-2423592,2424050-2424126,
           2424393-2424563,2425095-2425171,2425299-2425401,
           2426066-2426185,2426301-2426444,2426826-2426975,
           2427398-2427541,2427816-2427903,2428672-2428799,
           2429329-2429533,2429843-2430015,2430174-2430392,
           2430490-2430684
          Length = 1213

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +1

Query: 616 EILEFVLKFDEYKMKTPAIQNDFSYYRRXFSR 711
           ++L+ +++ D  K    +I NDFS+Y+R F++
Sbjct: 158 KLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQ 189


>05_01_0145 +
           950312-950505,950998-951482,951532-951913,952127-952229
          Length = 387

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +2

Query: 251 LRSSPRYDIFLDFENAAPTMTERDVYDDV-QRVLLESEKILEEIQCYKGAGKEIREAIAD 427
           +R++PR D      N  P + + D+  D+ Q+ L   + + E +Q   G   E+ E ++ 
Sbjct: 141 VRTAPRLDKLRKLLNERPYVLDEDLGSDLQQKGLYTWQDLCELVQASDG---ELTEQLSS 197

Query: 428 PSRISQERAWRAV 466
            S +  +  WR V
Sbjct: 198 ISAVEIDGFWRMV 210


>07_03_1535 +
           27531468-27531892,27531988-27532407,27533183-27533341,
           27533461-27533782
          Length = 441

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +3

Query: 153 GHAVYFADENILTVKIFIKMGKLLSLLSRDESHCARRLDMIYSWISRMPRPQ*PNAMFTT 332
           GH  +++ E +L ++   ++GK L L    E+   R ++ + SW+ R   P     +F T
Sbjct: 271 GH--WWSRERLLQLRCNFQVGKKLILNMSIEAAYQRAMNTLTSWVHREVNPHKSLVIFRT 328

Query: 333 MS 338
            S
Sbjct: 329 YS 330


>04_04_0290 -
           24174361-24174744,24175057-24175209,24175323-24175581,
           24175659-24176167
          Length = 434

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 201 FIKMGKLLSLLSRDESHCARRLDMIYS 281
           +  +G + SLLSR+  H  RRLD+ +S
Sbjct: 70  YAMVGAVQSLLSRESRHDIRRLDLSFS 96


>03_06_0728 +
           35768830-35769324,35769404-35769462,35770440-35770509,
           35770626-35770748,35770836-35770964,35771268-35771717
          Length = 441

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 344 VLLESEKILEEIQCYKGAGKEIREAIADPSRI 439
           V+ E  K+ EE+    GAG+E  EA  D S++
Sbjct: 94  VVGEKRKVPEEVAAAAGAGQEEEEAFDDESKL 125


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,360,818
Number of Sequences: 37544
Number of extensions: 414418
Number of successful extensions: 1029
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)