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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0833
         (791 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20441| Best HMM Match : DUF1394 (HMM E-Value=0)                     81   8e-16
SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054)               31   1.1  
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.1  
SB_57442| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  
SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12)                     29   5.7  
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.7  
SB_24520| Best HMM Match : CFEM (HMM E-Value=1.2)                      29   5.7  
SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)                    28   7.5  
SB_19339| Best HMM Match : Transposase_21 (HMM E-Value=5.6e-05)        28   7.5  
SB_34331| Best HMM Match : Transposase_21 (HMM E-Value=0.00032)        28   7.5  
SB_41936| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   10.0 
SB_44188| Best HMM Match : Dynein_heavy (HMM E-Value=0.0091)           28   10.0 

>SB_20441| Best HMM Match : DUF1394 (HMM E-Value=0)
          Length = 522

 Score = 81.4 bits (192), Expect = 8e-16
 Identities = 38/59 (64%), Positives = 43/59 (72%)
 Frame = +1

Query: 556 GAMSPTQHLEQQQALVKQFAEILEFVLKFDEYKMKTPAIQNDFSYYRRXFSRGGIINSD 732
           G  +P +HLE+ QAL KQFAEIL F LKFD+ KM  P IQNDFSYYRR  SR  + NSD
Sbjct: 79  GPDTPIEHLEKHQALAKQFAEILHFTLKFDDLKMTNPNIQNDFSYYRRTLSRRKMANSD 137



 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +2

Query: 293 NAAPTMTERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAIADP-SRISQERAWRAVK 469
           +A PT TER+VY+ V+ VL  ++++LEE++ Y GA + IREAI++P +   QE AWR V 
Sbjct: 3   DAQPTETEREVYEVVKGVLDSADRMLEELRSYPGASQAIREAISNPMNEDLQEIAWREVV 62

Query: 470 PLVDKLLCCYNHS 508
           PLV KL   Y ++
Sbjct: 63  PLVGKLKTFYEYA 75


>SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054)
          Length = 425

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -2

Query: 304 GRGILEIQEYIISRRRAQCDSSRDKRLNNFPIFINI-FTVRIFSSAKYTAWPKRPYF*NS 128
           GRGI ++   I S R  + DS  ++ +NN P  + I  +     S     W K     ++
Sbjct: 190 GRGIFDLWNLIDSHRSFEKDSDEERHINNLPNCVGIVISAPSVQSMTCAIWVKMSILVDA 249

Query: 127 TVKFHLSLNIVQT 89
           T+   + + ++ T
Sbjct: 250 TLSKGIPVVVILT 262


>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3261

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 404 EIREAIADPSRISQERAWRAVKPLVDKLL--CCYNHSLSFKGWCPDCW 541
           E+ E  +DP ++    ++  +  + +KL    C   SLS  G CPD W
Sbjct: 498 ELEEIASDPDKVVSASSFEVLHEIAEKLKESLCRVASLSKDGQCPDNW 545


>SB_57442| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 552

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 22/93 (23%), Positives = 42/93 (45%)
 Frame = +2

Query: 248 ALRSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAIAD 427
           A R++   D+   F N A +  +R  +D + RV+   E        Y     E+  A+  
Sbjct: 148 AFRNATPLDMSAIFPNLAFSAVDR-FHDGLGRVVPGQEGGYSR---YLMLPLEVIPAVKQ 203

Query: 428 PSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526
            +   + +AW   +PL ++ L  +  S+ ++GW
Sbjct: 204 RALPERHKAWAPYRPLEEERLFAFGLSMDWEGW 236


>SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12)
          Length = 1020

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 386 YKGAGKE-IREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526
           Y GAGK    +A      +++  AW   + L +K L  +  S+ ++GW
Sbjct: 528 YPGAGKRPCSDAGCHRHSMARHEAWAPYRQLEEKRLFAFGLSMDWEGW 575


>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2391

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 404 EIREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526
           EI  A+   +   +  AW   +PL ++ L  +  S+ +KGW
Sbjct: 224 EIIPAVKQRALPERHEAWAHYRPLEEERLFAFGGSMDWKGW 264


>SB_24520| Best HMM Match : CFEM (HMM E-Value=1.2)
          Length = 813

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 404 EIREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526
           EI  A+   +   +  AW   +PL +K L  +  S+ ++GW
Sbjct: 170 EIIPAVKQRALPERHEAWAPYRPLEEKRLFAFGLSMDWEGW 210


>SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
          Length = 694

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +2

Query: 404 EIREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526
           EI  ++   +   +  AW   +PL ++LL  +  S+ ++GW
Sbjct: 311 EIIPSVKQRALPERHEAWAPYRPLEEELLFAFGLSMDWEGW 351


>SB_19339| Best HMM Match : Transposase_21 (HMM E-Value=5.6e-05)
          Length = 290

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 223 NNFPIFINIFTVRIFSSAKYTAWP 152
           NNF I +N   V +F S+ Y  WP
Sbjct: 112 NNFAIQLNTDGVALFKSSSYAIWP 135


>SB_34331| Best HMM Match : Transposase_21 (HMM E-Value=0.00032)
          Length = 276

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 223 NNFPIFINIFTVRIFSSAKYTAWP 152
           NNF I +N   V +F S+ Y  WP
Sbjct: 112 NNFAIQLNTDGVALFKSSSYAIWP 135


>SB_41936| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 850

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +2

Query: 404 EIREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526
           EI  A+   +   +  AW   +PL ++ L  +  S+ ++GW
Sbjct: 34  EIIPAVKQRALPERHEAWAPYRPLEEERLFAFGLSMDYEGW 74


>SB_44188| Best HMM Match : Dynein_heavy (HMM E-Value=0.0091)
          Length = 254

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +1

Query: 631 VLKFDEYKMKTPAIQNDFSYYRRXFSRGGIINSDSHRARSSHNREVATDVIVL 789
           VLK  E ++KT     D  Y R  F  G   +++SH    S  +E+ TD+ ++
Sbjct: 137 VLKQQEDELKTRP--KDGCYIRGLFLEGARWDTESHELAESRPKELFTDMPII 187


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,509,105
Number of Sequences: 59808
Number of extensions: 471972
Number of successful extensions: 1450
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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