BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0833 (791 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_20441| Best HMM Match : DUF1394 (HMM E-Value=0) 81 8e-16 SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054) 31 1.1 SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_57442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3 SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12) 29 5.7 SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7 SB_24520| Best HMM Match : CFEM (HMM E-Value=1.2) 29 5.7 SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 28 7.5 SB_19339| Best HMM Match : Transposase_21 (HMM E-Value=5.6e-05) 28 7.5 SB_34331| Best HMM Match : Transposase_21 (HMM E-Value=0.00032) 28 7.5 SB_41936| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0 SB_44188| Best HMM Match : Dynein_heavy (HMM E-Value=0.0091) 28 10.0 >SB_20441| Best HMM Match : DUF1394 (HMM E-Value=0) Length = 522 Score = 81.4 bits (192), Expect = 8e-16 Identities = 38/59 (64%), Positives = 43/59 (72%) Frame = +1 Query: 556 GAMSPTQHLEQQQALVKQFAEILEFVLKFDEYKMKTPAIQNDFSYYRRXFSRGGIINSD 732 G +P +HLE+ QAL KQFAEIL F LKFD+ KM P IQNDFSYYRR SR + NSD Sbjct: 79 GPDTPIEHLEKHQALAKQFAEILHFTLKFDDLKMTNPNIQNDFSYYRRTLSRRKMANSD 137 Score = 67.7 bits (158), Expect = 1e-11 Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 1/73 (1%) Frame = +2 Query: 293 NAAPTMTERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAIADP-SRISQERAWRAVK 469 +A PT TER+VY+ V+ VL ++++LEE++ Y GA + IREAI++P + QE AWR V Sbjct: 3 DAQPTETEREVYEVVKGVLDSADRMLEELRSYPGASQAIREAISNPMNEDLQEIAWREVV 62 Query: 470 PLVDKLLCCYNHS 508 PLV KL Y ++ Sbjct: 63 PLVGKLKTFYEYA 75 >SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054) Length = 425 Score = 31.1 bits (67), Expect = 1.1 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = -2 Query: 304 GRGILEIQEYIISRRRAQCDSSRDKRLNNFPIFINI-FTVRIFSSAKYTAWPKRPYF*NS 128 GRGI ++ I S R + DS ++ +NN P + I + S W K ++ Sbjct: 190 GRGIFDLWNLIDSHRSFEKDSDEERHINNLPNCVGIVISAPSVQSMTCAIWVKMSILVDA 249 Query: 127 TVKFHLSLNIVQT 89 T+ + + ++ T Sbjct: 250 TLSKGIPVVVILT 262 >SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3261 Score = 31.1 bits (67), Expect = 1.1 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +2 Query: 404 EIREAIADPSRISQERAWRAVKPLVDKLL--CCYNHSLSFKGWCPDCW 541 E+ E +DP ++ ++ + + +KL C SLS G CPD W Sbjct: 498 ELEEIASDPDKVVSASSFEVLHEIAEKLKESLCRVASLSKDGQCPDNW 545 >SB_57442| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 552 Score = 29.1 bits (62), Expect = 4.3 Identities = 22/93 (23%), Positives = 42/93 (45%) Frame = +2 Query: 248 ALRSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAIAD 427 A R++ D+ F N A + +R +D + RV+ E Y E+ A+ Sbjct: 148 AFRNATPLDMSAIFPNLAFSAVDR-FHDGLGRVVPGQEGGYSR---YLMLPLEVIPAVKQ 203 Query: 428 PSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526 + + +AW +PL ++ L + S+ ++GW Sbjct: 204 RALPERHKAWAPYRPLEEERLFAFGLSMDWEGW 236 >SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12) Length = 1020 Score = 28.7 bits (61), Expect = 5.7 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +2 Query: 386 YKGAGKE-IREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526 Y GAGK +A +++ AW + L +K L + S+ ++GW Sbjct: 528 YPGAGKRPCSDAGCHRHSMARHEAWAPYRQLEEKRLFAFGLSMDWEGW 575 >SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2391 Score = 28.7 bits (61), Expect = 5.7 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = +2 Query: 404 EIREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526 EI A+ + + AW +PL ++ L + S+ +KGW Sbjct: 224 EIIPAVKQRALPERHEAWAHYRPLEEERLFAFGGSMDWKGW 264 >SB_24520| Best HMM Match : CFEM (HMM E-Value=1.2) Length = 813 Score = 28.7 bits (61), Expect = 5.7 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = +2 Query: 404 EIREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526 EI A+ + + AW +PL +K L + S+ ++GW Sbjct: 170 EIIPAVKQRALPERHEAWAPYRPLEEKRLFAFGLSMDWEGW 210 >SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) Length = 694 Score = 28.3 bits (60), Expect = 7.5 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +2 Query: 404 EIREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526 EI ++ + + AW +PL ++LL + S+ ++GW Sbjct: 311 EIIPSVKQRALPERHEAWAPYRPLEEELLFAFGLSMDWEGW 351 >SB_19339| Best HMM Match : Transposase_21 (HMM E-Value=5.6e-05) Length = 290 Score = 28.3 bits (60), Expect = 7.5 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -2 Query: 223 NNFPIFINIFTVRIFSSAKYTAWP 152 NNF I +N V +F S+ Y WP Sbjct: 112 NNFAIQLNTDGVALFKSSSYAIWP 135 >SB_34331| Best HMM Match : Transposase_21 (HMM E-Value=0.00032) Length = 276 Score = 28.3 bits (60), Expect = 7.5 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -2 Query: 223 NNFPIFINIFTVRIFSSAKYTAWP 152 NNF I +N V +F S+ Y WP Sbjct: 112 NNFAIQLNTDGVALFKSSSYAIWP 135 >SB_41936| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 850 Score = 27.9 bits (59), Expect = 10.0 Identities = 11/41 (26%), Positives = 21/41 (51%) Frame = +2 Query: 404 EIREAIADPSRISQERAWRAVKPLVDKLLCCYNHSLSFKGW 526 EI A+ + + AW +PL ++ L + S+ ++GW Sbjct: 34 EIIPAVKQRALPERHEAWAPYRPLEEERLFAFGLSMDYEGW 74 >SB_44188| Best HMM Match : Dynein_heavy (HMM E-Value=0.0091) Length = 254 Score = 27.9 bits (59), Expect = 10.0 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 631 VLKFDEYKMKTPAIQNDFSYYRRXFSRGGIINSDSHRARSSHNREVATDVIVL 789 VLK E ++KT D Y R F G +++SH S +E+ TD+ ++ Sbjct: 137 VLKQQEDELKTRP--KDGCYIRGLFLEGARWDTESHELAESRPKELFTDMPII 187 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,509,105 Number of Sequences: 59808 Number of extensions: 471972 Number of successful extensions: 1450 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1374 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1449 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2179815638 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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