BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0833 (791 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U23452-11|AAK31548.1| 334|Caenorhabditis elegans Hypothetical p... 64 1e-10 Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical p... 31 0.94 AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical ... 31 0.94 AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 31 1.2 AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical... 29 5.0 Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 6.7 Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 6.7 J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 6.7 Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 28 8.8 Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 28 8.8 Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 8.8 Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 8.8 Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 28 8.8 Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 28 8.8 >U23452-11|AAK31548.1| 334|Caenorhabditis elegans Hypothetical protein R07G3.8 protein. Length = 334 Score = 64.1 bits (149), Expect = 1e-10 Identities = 28/63 (44%), Positives = 42/63 (66%) Frame = +1 Query: 511 KLQRVVPRLLGSLVGGAMSPTQHLEQQQALVKQFAEILEFVLKFDEYKMKTPAIQNDFSY 690 K++++VP +L L G + + L +Q++ KQFA ++ FVL FD KM+T I ND+SY Sbjct: 113 KIEKIVPIILWELSSGPLPLEEQLANKQSIAKQFARLIGFVLDFDVVKMRTAQITNDYSY 172 Query: 691 YRR 699 YRR Sbjct: 173 YRR 175 Score = 43.6 bits (98), Expect = 2e-04 Identities = 24/72 (33%), Positives = 43/72 (59%) Frame = +2 Query: 272 DIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAIADPSRISQER 451 +IF+DFENA PT ER++Y+ + VL + + +L ++ Y G G A+ +++ + Sbjct: 32 EIFVDFENAQPTDEEREIYNMAEEVLNDCDLVLADVSSY-GNG-----CYAERNQLKNDS 85 Query: 452 AWRAVKPLVDKL 487 +A+K L+ KL Sbjct: 86 DTQALKVLMTKL 97 >Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical protein H12C20.2a protein. Length = 805 Score = 31.1 bits (67), Expect = 0.94 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Frame = +2 Query: 131 VLKIRSF-GPCSVFCG*EYSDRKDIYKNGKIIE-----SFIA*RVALRSSPRYDIFLDFE 292 + KIR F C CG SDR+ +Y N + +E S I + +Y I + F Sbjct: 265 LFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQFNKKQYPIIVLFI 324 Query: 293 NAAPTMTERDVYDDVQRVLLESEKIL 370 + P + +V D + V+LE E+ L Sbjct: 325 DVPPEKIDVNVTPDKKTVMLEKERHL 350 >AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical protein H12C20.2a protein. Length = 805 Score = 31.1 bits (67), Expect = 0.94 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Frame = +2 Query: 131 VLKIRSF-GPCSVFCG*EYSDRKDIYKNGKIIE-----SFIA*RVALRSSPRYDIFLDFE 292 + KIR F C CG SDR+ +Y N + +E S I + +Y I + F Sbjct: 265 LFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQFNKKQYPIIVLFI 324 Query: 293 NAAPTMTERDVYDDVQRVLLESEKIL 370 + P + +V D + V+LE E+ L Sbjct: 325 DVPPEKIDVNVTPDKKTVMLEKERHL 350 >AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical protein T05C3.2 protein. Length = 1733 Score = 30.7 bits (66), Expect = 1.2 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +2 Query: 323 VYDDVQRVLLESEKILEEIQCYKGAGKEI-REAIADPSRISQERAWRAVKPLVDK 484 +Y +QR++ + + L K G ++ RE ++D R ER W V +DK Sbjct: 597 IYSKMQRLIEDKRQYLMVPSLGKDLGFQVVREWLSDKGRTLSERQWNTVSKALDK 651 >AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical protein Y39G10AR.15 protein. Length = 704 Score = 28.7 bits (61), Expect = 5.0 Identities = 23/83 (27%), Positives = 41/83 (49%) Frame = +2 Query: 242 RVALRSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAI 421 R++ + + R D+FL N P RD + V RVL++ + L+++ A + + Sbjct: 385 RMSNKGAIRNDVFL---NNRPFWLARDGTEQVPRVLIQMHRPLKQMHSGNPASIQPKLHR 441 Query: 422 ADPSRISQERAWRAVKPLVDKLL 490 DP +E A +K +VDK + Sbjct: 442 TDPFLDPKEDALERLK-IVDKAI 463 >Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical protein F11C3.3 protein. Length = 1963 Score = 28.3 bits (60), Expect = 6.7 Identities = 14/48 (29%), Positives = 29/48 (60%) Frame = +2 Query: 305 TMTERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAIADPSRISQE 448 T +R + ++Q + + ++ L E YK A + ++AIAD +R+++E Sbjct: 1733 TSAKRKLEGEIQAIHADLDETLNE---YKAAEERSKKAIADATRLAEE 1777 >Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein F11C3.3 protein. Length = 1963 Score = 28.3 bits (60), Expect = 6.7 Identities = 14/48 (29%), Positives = 29/48 (60%) Frame = +2 Query: 305 TMTERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAIADPSRISQE 448 T +R + ++Q + + ++ L E YK A + ++AIAD +R+++E Sbjct: 1733 TSAKRKLEGEIQAIHADLDETLNE---YKAAEERSKKAIADATRLAEE 1777 >J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain protein. Length = 1966 Score = 28.3 bits (60), Expect = 6.7 Identities = 14/48 (29%), Positives = 29/48 (60%) Frame = +2 Query: 305 TMTERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAIADPSRISQE 448 T +R + ++Q + + ++ L E YK A + ++AIAD +R+++E Sbjct: 1736 TSAKRKLEGEIQAIHADLDETLNE---YKAAEERSKKAIADATRLAEE 1780 >Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical protein R11A8.7b protein. Length = 2584 Score = 27.9 bits (59), Expect = 8.8 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +1 Query: 574 QHLEQQQALVKQFAEILEFVLKFDEYKMKTPAIQND 681 QHL+QQQAL +Q I +F ++ +++ ++ +D Sbjct: 2312 QHLQQQQALQQQQQRIQQFQQQYQQHQSQSSQQPSD 2347 >Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical protein R11A8.7a protein. Length = 2606 Score = 27.9 bits (59), Expect = 8.8 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +1 Query: 574 QHLEQQQALVKQFAEILEFVLKFDEYKMKTPAIQND 681 QHL+QQQAL +Q I +F ++ +++ ++ +D Sbjct: 2334 QHLQQQQALQQQQQRIQQFQQQYQQHQSQSSQQPSD 2369 >Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein R11A8.7d protein. Length = 1427 Score = 27.9 bits (59), Expect = 8.8 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +1 Query: 574 QHLEQQQALVKQFAEILEFVLKFDEYKMKTPAIQND 681 QHL+QQQAL +Q I +F ++ +++ ++ +D Sbjct: 1155 QHLQQQQALQQQQQRIQQFQQQYQQHQSQSSQQPSD 1190 >Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein R11A8.7c protein. Length = 1405 Score = 27.9 bits (59), Expect = 8.8 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +1 Query: 574 QHLEQQQALVKQFAEILEFVLKFDEYKMKTPAIQND 681 QHL+QQQAL +Q I +F ++ +++ ++ +D Sbjct: 1133 QHLQQQQALQQQQQRIQQFQQQYQQHQSQSSQQPSD 1168 >Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein R11A8.7b protein. Length = 2584 Score = 27.9 bits (59), Expect = 8.8 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +1 Query: 574 QHLEQQQALVKQFAEILEFVLKFDEYKMKTPAIQND 681 QHL+QQQAL +Q I +F ++ +++ ++ +D Sbjct: 2312 QHLQQQQALQQQQQRIQQFQQQYQQHQSQSSQQPSD 2347 >Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein R11A8.7a protein. Length = 2606 Score = 27.9 bits (59), Expect = 8.8 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +1 Query: 574 QHLEQQQALVKQFAEILEFVLKFDEYKMKTPAIQND 681 QHL+QQQAL +Q I +F ++ +++ ++ +D Sbjct: 2334 QHLQQQQALQQQQQRIQQFQQQYQQHQSQSSQQPSD 2369 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,322,273 Number of Sequences: 27780 Number of extensions: 357429 Number of successful extensions: 834 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 797 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 834 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1924757034 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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