Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0833
(791 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g18410.2 68418.m02167 expressed protein similar to p53 induci... 30 1.5
At5g18410.1 68418.m02166 expressed protein similar to p53 induci... 30 1.5
At3g21770.1 68416.m02746 peroxidase 30 (PER30) (P30) (PRXR9) ide... 29 4.7
At1g17210.1 68414.m02097 expressed protein distantly related to ... 29 4.7
At5g45250.1 68418.m05553 disease resistance protein (TIR-NBS-LRR... 28 6.2
At3g02930.1 68416.m00288 expressed protein ; expression support... 28 6.2
At5g07310.1 68418.m00835 AP2 domain-containing transcription fac... 28 8.2
At3g16180.1 68416.m02043 proton-dependent oligopeptide transport... 28 8.2
At1g52190.1 68414.m05889 proton-dependent oligopeptide transport... 28 8.2
>At5g18410.2 68418.m02167 expressed protein similar to p53 inducible
protein [Homo sapiens] GI:5616320
Length = 1017
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 616 EILEFVLKFDEYKMKTPAIQNDFSYYRRXFSR 711
++L+ +++ D K +I NDFS+Y+R F++
Sbjct: 158 KLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQ 189
>At5g18410.1 68418.m02166 expressed protein similar to p53 inducible
protein [Homo sapiens] GI:5616320
Length = 1234
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 616 EILEFVLKFDEYKMKTPAIQNDFSYYRRXFSR 711
++L+ +++ D K +I NDFS+Y+R F++
Sbjct: 158 KLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQ 189
>At3g21770.1 68416.m02746 peroxidase 30 (PER30) (P30) (PRXR9)
identical to SP|Q9LSY7 Peroxidase 30 precursor (EC
1.11.1.7) (Atperox P30) (PRXR9) (ATP7a) {Arabidopsis
thaliana}
Length = 329
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 679 DFSYYRRXFSRGGIINSDSHRARSSHNREVATDVI 783
D SYYR R G+ SDS +S +V D++
Sbjct: 255 DLSYYRLVLKRRGLFQSDSALTTNSATLKVINDLV 289
>At1g17210.1 68414.m02097 expressed protein distantly related to
dentin phosphoryn [Homo sapiens] (GI:4322670)
Length = 958
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 419 IADPSRISQERAWRAVKPLVDKLLCCYNHSLSFK 520
I PS I Q RA R +P +D+LL N LSF+
Sbjct: 209 IVSPSAIDQMRASR--RPQIDRLLAHANDDLSFR 240
>At5g45250.1 68418.m05553 disease resistance protein (TIR-NBS-LRR
class), putative (RPS4) domain signature TIR-NBS-LRR
exists, suggestive of a disease resistance protein.
Identical to RPS4 (GI:11357255). False intron created at
intron 2 to escape a frameshift in the BAC sequence.
Length = 1217
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 374 EIQCYKGAGKEIREAIADPSRISQERAWRAVKPLVDKLL 490
+I C++ K+ E++ S + A AVK L DK L
Sbjct: 459 DIACFRSQDKDYVESLLASSDLGSAEAMSAVKSLTDKFL 497
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 314 ERDVYDDVQRVLLESEKILEEIQCYKGAGKEIREAIADPSRISQERAWRAVKPLVDKLL 490
E+D VQR+L E +KIL E++ K ++ ++A+ + E + + + L +KLL
Sbjct: 420 EQDATSSVQRLLEEKKKILSELESSKEEEEKSKKAMESLASALHEVSSES-RELKEKLL 477
>At5g07310.1 68418.m00835 AP2 domain-containing transcription
factor, putative AP2 domain containing
proteins/transcription factors
Length = 263
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 270 YRGDERNATRHAIKDSIIFPFL*ISLRSEY 181
+RGDE + + A D IFPF S RS+Y
Sbjct: 12 FRGDESDEKKEADDDENIFPF--FSARSQY 39
>At3g16180.1 68416.m02043 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 591
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 128 AVLKIRSFG--PCSVFCG*EYSDRKDIYKNGKIIESF 232
A++ I S G PCS+ G + D K+ KN +++ESF
Sbjct: 150 ALISIGSGGIRPCSLAFGADQLDNKENPKNERVLESF 186
>At1g52190.1 68414.m05889 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 607
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 128 AVLKIRSFG--PCSVFCG*EYSDRKDIYKNGKIIESF 232
A++ I S G PCS+ G + D K+ KN +++ESF
Sbjct: 149 ALISIGSGGIRPCSLAFGADQLDNKENPKNERVLESF 185
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,235,658
Number of Sequences: 28952
Number of extensions: 327924
Number of successful extensions: 831
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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