Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0830
         (486 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    25   1.8  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    25   1.8  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   5.6  
AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.       23   5.6  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        22   9.7  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     22   9.7  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 318 QSIGDEDSINFQPSPNFKHMXKYLKC 395
           Q  GDE+   FQ   + KH  + +KC
Sbjct: 151 QKFGDEEHYIFQHDNDSKHTSRTVKC 176


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 318 QSIGDEDSINFQPSPNFKHMXKYLKC 395
           Q  GDE+   FQ   + KH  + +KC
Sbjct: 223 QQFGDEEHYIFQHDNDSKHTSRTVKC 248


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 327 GDEDSINFQPSPNFKHMXKYLKCKFWEESHSPQYHAVTE 443
           GD+ S+    + NF  +  Y K   W+    P Y  V E
Sbjct: 176 GDQVSLALYNNKNFVDLSDYWKSGTWDIIEVPAYLNVYE 214


>AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.
          Length = 113

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -2

Query: 140 ILKSQ*AERRFVDKILLLLNKRDHTRLDL 54
           +++S  A +RF++ ++  ++K +   LDL
Sbjct: 83  LVRSSQARKRFIENVMKFIDKYNFDGLDL 111


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 5   ILNQTIEFIENLVLIFL 55
           ILNQ ++FI N   +FL
Sbjct: 382 ILNQPVKFIANRPFLFL 398


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 356 WLKINRIFIPYTLEICLAC 300
           WLK+    I +T E C+ C
Sbjct: 302 WLKVVDCGIRWTCECCIEC 320


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,114
Number of Sequences: 2352
Number of extensions: 8256
Number of successful extensions: 64
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)