Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0830
         (486 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93377-10|CAB07574.2|  321|Caenorhabditis elegans Hypothetical p...    29   1.4  
AY150815-1|AAN61049.1|  964|Caenorhabditis elegans ADR-1C protein.     29   1.4  
Z96100-1|CAB09530.2|  964|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical ...    27   9.5  
AC024214-7|AAF36078.2|  189|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z93377-10|CAB07574.2|  321|Caenorhabditis elegans Hypothetical
           protein F13A7.2 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 400 NLHFKYFX-ICLKFGDG*KLIESSSPILWKFVWPASXFAFISFTPKRSLNI 251
           NLH  Y+  +CLK+ D  K+   +   +W ++ P      I  +P+R L +
Sbjct: 107 NLHTMYYRTLCLKYLDAKKVRLWTLVFMWHYLCPLIYLIVIITSPQRHLEV 157


>AY150815-1|AAN61049.1|  964|Caenorhabditis elegans ADR-1C protein.
          Length = 964

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 276 KEINAXSDAGQTNFQSIGDEDSINFQPSP 362
           KEI+A S  GQ N +++   D+I+ QP+P
Sbjct: 261 KEIDAASGNGQNNKRNLLQADAISHQPTP 289


>Z96100-1|CAB09530.2|  964|Caenorhabditis elegans Hypothetical
           protein H15N14.1c protein.
          Length = 964

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 276 KEINAXSDAGQTNFQSIGDEDSINFQPSP 362
           KEI+A S  GQ N +++   D+I+ QP+P
Sbjct: 261 KEIDAASGNGQNNKRNLLQADAISNQPTP 289


>AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical
           protein F02E11.2 protein.
          Length = 514

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 336 LHPLYSGNLSGLRLXSHLFLLPQKGHSTF 250
           + PLY    +GL   +H F L QK H  F
Sbjct: 270 IFPLYCFLATGLAPGAHFFFLTQKNHRFF 298


>AC024214-7|AAF36078.2|  189|Caenorhabditis elegans Hypothetical
           protein Y77E11A.8 protein.
          Length = 189

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 128 DF*EYFSLSADSSPHAAYFT*RSSLSMNFACNGNY 232
           D+  Y+    D + +A     + S  MN++CNGN+
Sbjct: 100 DYPPYWPYHTDYTIYATLTGWKISYKMNYSCNGNF 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,079,922
Number of Sequences: 27780
Number of extensions: 195697
Number of successful extensions: 390
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)