BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0830 (486 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z93377-10|CAB07574.2| 321|Caenorhabditis elegans Hypothetical p... 29 1.4 AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 29 1.4 Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 29 2.4 AF016661-1|AAB66049.2| 514|Caenorhabditis elegans Hypothetical ... 27 9.5 AC024214-7|AAF36078.2| 189|Caenorhabditis elegans Hypothetical ... 27 9.5 >Z93377-10|CAB07574.2| 321|Caenorhabditis elegans Hypothetical protein F13A7.2 protein. Length = 321 Score = 29.5 bits (63), Expect = 1.4 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -3 Query: 400 NLHFKYFX-ICLKFGDG*KLIESSSPILWKFVWPASXFAFISFTPKRSLNI 251 NLH Y+ +CLK+ D K+ + +W ++ P I +P+R L + Sbjct: 107 NLHTMYYRTLCLKYLDAKKVRLWTLVFMWHYLCPLIYLIVIITSPQRHLEV 157 >AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. Length = 964 Score = 29.5 bits (63), Expect = 1.4 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = +3 Query: 276 KEINAXSDAGQTNFQSIGDEDSINFQPSP 362 KEI+A S GQ N +++ D+I+ QP+P Sbjct: 261 KEIDAASGNGQNNKRNLLQADAISHQPTP 289 >Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical protein H15N14.1c protein. Length = 964 Score = 28.7 bits (61), Expect = 2.4 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = +3 Query: 276 KEINAXSDAGQTNFQSIGDEDSINFQPSP 362 KEI+A S GQ N +++ D+I+ QP+P Sbjct: 261 KEIDAASGNGQNNKRNLLQADAISNQPTP 289 >AF016661-1|AAB66049.2| 514|Caenorhabditis elegans Hypothetical protein F02E11.2 protein. Length = 514 Score = 26.6 bits (56), Expect = 9.5 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -1 Query: 336 LHPLYSGNLSGLRLXSHLFLLPQKGHSTF 250 + PLY +GL +H F L QK H F Sbjct: 270 IFPLYCFLATGLAPGAHFFFLTQKNHRFF 298 >AC024214-7|AAF36078.2| 189|Caenorhabditis elegans Hypothetical protein Y77E11A.8 protein. Length = 189 Score = 26.6 bits (56), Expect = 9.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +2 Query: 128 DF*EYFSLSADSSPHAAYFT*RSSLSMNFACNGNY 232 D+ Y+ D + +A + S MN++CNGN+ Sbjct: 100 DYPPYWPYHTDYTIYATLTGWKISYKMNYSCNGNF 134 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,079,922 Number of Sequences: 27780 Number of extensions: 195697 Number of successful extensions: 390 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 384 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 390 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 903458030 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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