Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0829
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    25   0.57 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    25   0.57 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    25   0.76 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.1  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 152 LKAIPIYLMYESEP*Q*NLRCW*EYFIQY 238
           L ++PI + YE +  +  L+CW E+  Q+
Sbjct: 152 LYSLPILIFYEEKIVKGKLQCWIEFHPQW 180


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 15/73 (20%), Positives = 34/73 (46%)
 Frame = +1

Query: 55  FTTNLKIRTSRFFVNCQFLYYSCKLLVSAGYIIKGNTYLFNV*IRTLTIKSKMLVGILYT 234
           F   L  +  RF++ C  +     + +S GY+I   +   ++    L+I   +++  L  
Sbjct: 515 FMIGLNSQGFRFYIACGIMILVANVAISFGYLISCVSRSVSM---ALSIGPPLVIPFLLF 571

Query: 235 ILYYIRLKSVTIY 273
             +++ + S+ IY
Sbjct: 572 GGFFLNVSSIPIY 584


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 15/73 (20%), Positives = 33/73 (45%)
 Frame = +1

Query: 55  FTTNLKIRTSRFFVNCQFLYYSCKLLVSAGYIIKGNTYLFNV*IRTLTIKSKMLVGILYT 234
           F   L     RF++ C  +     + +S GY+I   +   ++    L+I   +++  L  
Sbjct: 515 FMIGLNSHGFRFYIACGIMILVANVAISFGYLISCVSRSVSM---ALSIGPPLVIPFLLF 571

Query: 235 ILYYIRLKSVTIY 273
             +++ + S+ IY
Sbjct: 572 GGFFLNVSSIPIY 584


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 341 NK*LSTLRRQLIFCYFVF 288
           N  +S L+   +FCYF++
Sbjct: 135 NDYVSLLQLVFVFCYFIY 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,499
Number of Sequences: 336
Number of extensions: 3174
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)