BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0828 (735 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0370 + 2909216-2909797 41 9e-04 04_03_0463 - 16200690-16200986,16202010-16202258,16202562-162026... 33 0.24 12_01_0605 - 4983235-4983849,4985658-4986578 30 2.2 08_02_1449 - 27174451-27178005 29 2.9 01_01_0090 + 706340-707296,707370-707513,707596-707682,707771-70... 29 2.9 01_01_0088 + 688792-691441,691629-693013 29 2.9 10_01_0256 - 2688172-2688786,2690779-2690857,2691567-2691652,269... 29 3.8 01_01_0320 - 2578911-2579144,2579243-2579455,2579580-2579858,257... 29 3.8 11_03_0181 - 11301759-11301838,11302294-11303095 29 5.1 01_02_0038 - 10487024-10487728,10487824-10488272,10488356-10489070 28 6.7 08_02_0196 - 14125037-14125175,14125525-14125604,14125938-141264... 28 8.8 01_05_0003 - 16841745-16841912,16842005-16842259,16842938-168430... 28 8.8 >05_01_0370 + 2909216-2909797 Length = 193 Score = 41.1 bits (92), Expect = 9e-04 Identities = 24/84 (28%), Positives = 36/84 (42%) Frame = +1 Query: 256 MGYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAA 435 M A++++W E G L + QL+ +W P+ GL + ++ A Sbjct: 98 MALAAWMVWAE-GGLHRRPGATLAPFVAQLVAALAWAPLALGLAAPAAGLACCAAMAAGA 156 Query: 436 VATTLSFGSVNKTAGLLLIPYLAW 507 A FG VN AG L P +AW Sbjct: 157 AACARGFGGVNPVAGDLAKPCVAW 180 >04_03_0463 - 16200690-16200986,16202010-16202258,16202562-16202697, 16203150-16203368,16204137-16204515,16205010-16205253 Length = 507 Score = 33.1 bits (72), Expect = 0.24 Identities = 26/73 (35%), Positives = 35/73 (47%) Frame = -2 Query: 653 YYLFEINTFSYIYI*GIKQNIPLSGSLLSLHRFRIVLPDVVRKGAGISGQAKYGMSNKPA 474 Y L EIN +I ++ L LL H F V PDV K G G+ G++N P Sbjct: 47 YSLSEINASEFIS--SSLHDVALRFRLLRQHGFH-VSPDVFNKFKGDDGRFVSGITNDPR 103 Query: 473 VLLTLPNDSVVAT 435 LL+L N + + T Sbjct: 104 GLLSLYNAAHLLT 116 >12_01_0605 - 4983235-4983849,4985658-4986578 Length = 511 Score = 29.9 bits (64), Expect = 2.2 Identities = 13/32 (40%), Positives = 22/32 (68%) Frame = -2 Query: 581 GSLLSLHRFRIVLPDVVRKGAGISGQAKYGMS 486 GSL+ H+F+ LP+VV+K G+ K+G++ Sbjct: 467 GSLV--HQFQWTLPEVVKKNGGVDMAEKFGLT 496 >08_02_1449 - 27174451-27178005 Length = 1184 Score = 29.5 bits (63), Expect = 2.9 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +1 Query: 322 LTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAVATTLSF-GSVNKTAGLLLIPY 498 L +Y L+N PI L F+ I ++ LS A + L++ G + + L +IP Sbjct: 878 LKIYNCPKLVNIPKAPILRELDIFQCR-IALNSLSHLAALSQLNYVGDWSVSKDLQVIPI 936 Query: 499 LAWPDMPAPFLTTSGRTIL 555 +WP + L + G ++L Sbjct: 937 RSWPSLVTLALASLGNSLL 955 >01_01_0090 + 706340-707296,707370-707513,707596-707682,707771-708105, 708462-708702,708783-708857,708932-709017,709451-709523, 709637-709961,710092-711750,711938-713322 Length = 1788 Score = 29.5 bits (63), Expect = 2.9 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +2 Query: 149 IRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSTWD-MPLTSSGRNVMVLLKMQSYLS 325 +RK + K W + L+K W K T L ++D +P + L + Y Sbjct: 901 LRKKPTRKHWMEILEKEEWLKQKDGDDSIITALKISYDYLPFYLKKCFSYLALFPEDYEF 960 Query: 326 HCTEYSCYSTGLGLLFSS 379 E SCY +G++ SS Sbjct: 961 DSLEISCYWDSIGIINSS 978 >01_01_0088 + 688792-691441,691629-693013 Length = 1344 Score = 29.5 bits (63), Expect = 2.9 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +2 Query: 149 IRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSTWD-MPLTSSGRNVMVLLKMQSYLS 325 +RK + K W + L+K W K T L ++D +P + L + Y Sbjct: 457 LRKKPTRKHWMEILEKEEWLKQKDGDDSIITALKISYDYLPFYLKKCFSYLALFPEDYEF 516 Query: 326 HCTEYSCYSTGLGLLFSS 379 E SCY +G++ SS Sbjct: 517 DSLEISCYWDSIGIINSS 534 >10_01_0256 - 2688172-2688786,2690779-2690857,2691567-2691652, 2693046-2693113,2695175-2695244,2696191-2696320, 2696924-2697906 Length = 676 Score = 29.1 bits (62), Expect = 3.8 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = -2 Query: 566 LHRFRIVLPDVVRKGAGISGQAKYGMS 486 +H+F+ LP+VV+K G+ K+G++ Sbjct: 635 VHQFQWTLPEVVKKNGGVDMAEKFGIT 661 >01_01_0320 - 2578911-2579144,2579243-2579455,2579580-2579858, 2579961-2580050,2580258-2580439,2581366-2582470 Length = 700 Score = 29.1 bits (62), Expect = 3.8 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +2 Query: 173 SWYDELKKPSWTPPK 217 SW +E+KKPSW P K Sbjct: 600 SWQEEIKKPSWHPYK 614 >11_03_0181 - 11301759-11301838,11302294-11303095 Length = 293 Score = 28.7 bits (61), Expect = 5.1 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +2 Query: 203 WTPPKWVFGPAWTVLYSTWDMPLTSSGRNVMVLLKM 310 WT P W TVL STW + ++S V ++ + Sbjct: 236 WTSPVWSATSRPTVLLSTWQVTCSTSSHRVKQVIDL 271 >01_02_0038 - 10487024-10487728,10487824-10488272,10488356-10489070 Length = 622 Score = 28.3 bits (60), Expect = 6.7 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +1 Query: 397 LAFIEISVLSGAAVATTLSFGSVNKTAGLLLIPYLAWPDMPAPFL 531 +AF+E+ V G T ++ A L L+P L P++PAP L Sbjct: 265 VAFLEVEVDGGTPARTPTE--RLDVPAFLRLVPSLEVPELPAPVL 307 >08_02_0196 - 14125037-14125175,14125525-14125604,14125938-14126463, 14126809-14126852,14127444-14127584,14127696-14128463 Length = 565 Score = 27.9 bits (59), Expect = 8.8 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 Query: 226 WSSLDCSLQHMGYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSW 363 W+S + S+ +L+ E D D V+P+ + +LL W W Sbjct: 74 WTSCNLSITRRVKVPFLLGEFSDNVECD-VVPVPMSSCHILLGWQW 118 >01_05_0003 - 16841745-16841912,16842005-16842259,16842938-16843085, 16843740-16843854,16844294-16844465,16844481-16844617, 16844738-16844792 Length = 349 Score = 27.9 bits (59), Expect = 8.8 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Frame = +2 Query: 155 KDNSEKSWYDELKKPSWTP----PKWVFGPAWTVLYSTWDMPLTSSGRNVM 295 +++S S ++ + W P P W P ++ STW P+ + G +M Sbjct: 231 RESSSYSTPVKMYEAGWAPTGDAPGWTQAPRHSIGVSTWQAPVRTGGMRLM 281 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,184,008 Number of Sequences: 37544 Number of extensions: 495603 Number of successful extensions: 1242 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1203 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1242 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1933531792 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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