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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0828
         (735 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0370 + 2909216-2909797                                           41   9e-04
04_03_0463 - 16200690-16200986,16202010-16202258,16202562-162026...    33   0.24 
12_01_0605 - 4983235-4983849,4985658-4986578                           30   2.2  
08_02_1449 - 27174451-27178005                                         29   2.9  
01_01_0090 + 706340-707296,707370-707513,707596-707682,707771-70...    29   2.9  
01_01_0088 + 688792-691441,691629-693013                               29   2.9  
10_01_0256 - 2688172-2688786,2690779-2690857,2691567-2691652,269...    29   3.8  
01_01_0320 - 2578911-2579144,2579243-2579455,2579580-2579858,257...    29   3.8  
11_03_0181 - 11301759-11301838,11302294-11303095                       29   5.1  
01_02_0038 - 10487024-10487728,10487824-10488272,10488356-10489070     28   6.7  
08_02_0196 - 14125037-14125175,14125525-14125604,14125938-141264...    28   8.8  
01_05_0003 - 16841745-16841912,16842005-16842259,16842938-168430...    28   8.8  

>05_01_0370 + 2909216-2909797
          Length = 193

 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 24/84 (28%), Positives = 36/84 (42%)
 Frame = +1

Query: 256 MGYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAA 435
           M  A++++W E  G        L  +  QL+   +W P+  GL          + ++  A
Sbjct: 98  MALAAWMVWAE-GGLHRRPGATLAPFVAQLVAALAWAPLALGLAAPAAGLACCAAMAAGA 156

Query: 436 VATTLSFGSVNKTAGLLLIPYLAW 507
            A    FG VN  AG L  P +AW
Sbjct: 157 AACARGFGGVNPVAGDLAKPCVAW 180


>04_03_0463 -
           16200690-16200986,16202010-16202258,16202562-16202697,
           16203150-16203368,16204137-16204515,16205010-16205253
          Length = 507

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 26/73 (35%), Positives = 35/73 (47%)
 Frame = -2

Query: 653 YYLFEINTFSYIYI*GIKQNIPLSGSLLSLHRFRIVLPDVVRKGAGISGQAKYGMSNKPA 474
           Y L EIN   +I       ++ L   LL  H F  V PDV  K  G  G+   G++N P 
Sbjct: 47  YSLSEINASEFIS--SSLHDVALRFRLLRQHGFH-VSPDVFNKFKGDDGRFVSGITNDPR 103

Query: 473 VLLTLPNDSVVAT 435
            LL+L N + + T
Sbjct: 104 GLLSLYNAAHLLT 116


>12_01_0605 - 4983235-4983849,4985658-4986578
          Length = 511

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -2

Query: 581 GSLLSLHRFRIVLPDVVRKGAGISGQAKYGMS 486
           GSL+  H+F+  LP+VV+K  G+    K+G++
Sbjct: 467 GSLV--HQFQWTLPEVVKKNGGVDMAEKFGLT 496


>08_02_1449 - 27174451-27178005
          Length = 1184

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +1

Query: 322  LTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAVATTLSF-GSVNKTAGLLLIPY 498
            L +Y    L+N    PI   L  F+   I ++ LS  A  + L++ G  + +  L +IP 
Sbjct: 878  LKIYNCPKLVNIPKAPILRELDIFQCR-IALNSLSHLAALSQLNYVGDWSVSKDLQVIPI 936

Query: 499  LAWPDMPAPFLTTSGRTIL 555
             +WP +    L + G ++L
Sbjct: 937  RSWPSLVTLALASLGNSLL 955


>01_01_0090 + 706340-707296,707370-707513,707596-707682,707771-708105,
            708462-708702,708783-708857,708932-709017,709451-709523,
            709637-709961,710092-711750,711938-713322
          Length = 1788

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +2

Query: 149  IRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSTWD-MPLTSSGRNVMVLLKMQSYLS 325
            +RK  + K W + L+K  W   K       T L  ++D +P         + L  + Y  
Sbjct: 901  LRKKPTRKHWMEILEKEEWLKQKDGDDSIITALKISYDYLPFYLKKCFSYLALFPEDYEF 960

Query: 326  HCTEYSCYSTGLGLLFSS 379
               E SCY   +G++ SS
Sbjct: 961  DSLEISCYWDSIGIINSS 978


>01_01_0088 + 688792-691441,691629-693013
          Length = 1344

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +2

Query: 149 IRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSTWD-MPLTSSGRNVMVLLKMQSYLS 325
           +RK  + K W + L+K  W   K       T L  ++D +P         + L  + Y  
Sbjct: 457 LRKKPTRKHWMEILEKEEWLKQKDGDDSIITALKISYDYLPFYLKKCFSYLALFPEDYEF 516

Query: 326 HCTEYSCYSTGLGLLFSS 379
              E SCY   +G++ SS
Sbjct: 517 DSLEISCYWDSIGIINSS 534


>10_01_0256 -
           2688172-2688786,2690779-2690857,2691567-2691652,
           2693046-2693113,2695175-2695244,2696191-2696320,
           2696924-2697906
          Length = 676

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -2

Query: 566 LHRFRIVLPDVVRKGAGISGQAKYGMS 486
           +H+F+  LP+VV+K  G+    K+G++
Sbjct: 635 VHQFQWTLPEVVKKNGGVDMAEKFGIT 661


>01_01_0320 -
           2578911-2579144,2579243-2579455,2579580-2579858,
           2579961-2580050,2580258-2580439,2581366-2582470
          Length = 700

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 173 SWYDELKKPSWTPPK 217
           SW +E+KKPSW P K
Sbjct: 600 SWQEEIKKPSWHPYK 614


>11_03_0181 - 11301759-11301838,11302294-11303095
          Length = 293

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 203 WTPPKWVFGPAWTVLYSTWDMPLTSSGRNVMVLLKM 310
           WT P W      TVL STW +  ++S   V  ++ +
Sbjct: 236 WTSPVWSATSRPTVLLSTWQVTCSTSSHRVKQVIDL 271


>01_02_0038 - 10487024-10487728,10487824-10488272,10488356-10489070
          Length = 622

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +1

Query: 397 LAFIEISVLSGAAVATTLSFGSVNKTAGLLLIPYLAWPDMPAPFL 531
           +AF+E+ V  G    T      ++  A L L+P L  P++PAP L
Sbjct: 265 VAFLEVEVDGGTPARTPTE--RLDVPAFLRLVPSLEVPELPAPVL 307


>08_02_0196 -
           14125037-14125175,14125525-14125604,14125938-14126463,
           14126809-14126852,14127444-14127584,14127696-14128463
          Length = 565

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 226 WSSLDCSLQHMGYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSW 363
           W+S + S+       +L+ E  D    D V+P+ +    +LL W W
Sbjct: 74  WTSCNLSITRRVKVPFLLGEFSDNVECD-VVPVPMSSCHILLGWQW 118


>01_05_0003 -
           16841745-16841912,16842005-16842259,16842938-16843085,
           16843740-16843854,16844294-16844465,16844481-16844617,
           16844738-16844792
          Length = 349

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = +2

Query: 155 KDNSEKSWYDELKKPSWTP----PKWVFGPAWTVLYSTWDMPLTSSGRNVM 295
           +++S  S   ++ +  W P    P W   P  ++  STW  P+ + G  +M
Sbjct: 231 RESSSYSTPVKMYEAGWAPTGDAPGWTQAPRHSIGVSTWQAPVRTGGMRLM 281


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,184,008
Number of Sequences: 37544
Number of extensions: 495603
Number of successful extensions: 1242
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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