Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0828
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 33 0.21
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical ... 30 2.0
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 30 2.0
AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical ... 29 2.6
AF036700-4|AAV34787.1| 437|Caenorhabditis elegans Hypothetical ... 29 4.5
AF036700-3|AAB88366.2| 479|Caenorhabditis elegans Hypothetical ... 29 4.5
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 28 7.9
Z50739-2|CAA90602.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 28 7.9
>Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical
protein C41G7.3 protein.
Length = 553
Score = 58.4 bits (135), Expect = 5e-09
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +1
Query: 208 SPK-VGIWSSLDC-SLQHMGYASYLIWEECDGFT-EDAVLPLTLYGVQLLLNWSWTPIFF 378
+PK V ++S++D +L +GYASYL+++ GF D L L LYG + L + PI
Sbjct: 431 APKDVRVYSAVDLLTLSPLGYASYLVYKNGGGFDYNDTKLALGLYGASVTLAVATIPIV- 489
Query: 379 GLKDFKLAFIEISVLSGAAVATTLSFGSVNKTAGLLLIPYLAW 507
K+ + +V+S A A + +F ++K AGLL++P+ W
Sbjct: 490 KKKELGCLWKNTTVVSLTAAAASFAFYKIDKKAGLLVVPFAVW 532
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = -2
Query: 461 LPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVKPSHSS 282
LP D V + D E++ S KS P++IG D SSS +VR R PS +
Sbjct: 878 LPEDPVSVQSRSDVCEVTAETSQKSVGPERIG-GDAQSSSENTVSVRNRVDLHGIPSKTP 936
Query: 281 Q 279
Q
Sbjct: 937 Q 937
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = -2
Query: 461 LPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVKPSHSS 282
LP D V + D E++ S KS P++IG D SSS +VR R PS +
Sbjct: 878 LPEDPVSVQSRSDVCEVTAETSQKSVGPERIG-GDAQSSSENTVSVRNRVDLHGIPSKTP 936
Query: 281 Q 279
Q
Sbjct: 937 Q 937
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Frame = +2
Query: 317 YLSHCTEYS--CYSTGLGL----LF---SSD*RTSSWHSLRSQCCPGQQWQRHCHSAVSI 469
Y +H TE++ ++ L L LF SS+ W+ +R+ P RH A+ I
Sbjct: 42 YFTHTTEFNKNIHNAPLSLRENTLFAFNSSNCPYKEWNQIRTDSIPNAN--RHADWAIQI 99
Query: 470 RQPVCYSYHT 499
++P Y YHT
Sbjct: 100 KKPSKYLYHT 109
>AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical
protein H24G06.1d protein.
Length = 669
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = -2
Query: 542 PDVVRKGAGISGQAKYGMSNK---PAVLLTLPNDSVVATAAPDSTEISMNASLKSFNPKK 372
P V + ++ Q SN A L +P S + PD + + +S +P K
Sbjct: 158 PKTVWSPSALANQGAPRRSNSNLFAATNLEVPPTSTNLSRRPDDLNFASSLRSRSQSPNK 217
Query: 371 IGVQDQLSSSCTPYNVRGRTASSVKPSHSSQMR 273
+ ++S TP + T SS+ + Q R
Sbjct: 218 FALSQMINSRDTPSSPSSTTGSSIVGRNLQQRR 250
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = -2
Query: 542 PDVVRKGAGISGQAKYGMSNK---PAVLLTLPNDSVVATAAPDSTEISMNASLKSFNPKK 372
P V + ++ Q SN A L +P S + PD + + +S +P K
Sbjct: 1090 PKTVWSPSALANQGAPRRSNSNLFAATNLEVPPTSTNLSRRPDDLNFASSLRSRSQSPNK 1149
Query: 371 IGVQDQLSSSCTPYNVRGRTASSVKPSHSSQMR 273
+ ++S TP + T SS+ + Q R
Sbjct: 1150 FALSQMINSRDTPSSPSSTTGSSIVGRNLQQRR 1182
>AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical
protein H24G06.1e protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -2
Query: 476 AVLLTLPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVK 297
A L +P S + PD + + +S +P K + ++S TP + T SS+
Sbjct: 57 ATNLEVPPTSTNLSRRPDDLNFASSLRSRSQSPNKFALSQMINSRDTPSSPSSTTGSSIV 116
Query: 296 PSHSSQMR 273
+ Q R
Sbjct: 117 GRNLQQRR 124
>AF036700-4|AAV34787.1| 437|Caenorhabditis elegans Hypothetical
protein M04G7.3b protein.
Length = 437
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 410 SMNASLKSFNPKKIGVQDQLSSSCTPYN 327
S+N+S+K P KIG+ LS+ TP N
Sbjct: 401 SLNSSMKKSLPPKIGLPHPLSAEKTPLN 428
>AF036700-3|AAB88366.2| 479|Caenorhabditis elegans Hypothetical
protein M04G7.3a protein.
Length = 479
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 410 SMNASLKSFNPKKIGVQDQLSSSCTPYN 327
S+N+S+K P KIG+ LS+ TP N
Sbjct: 443 SLNSSMKKSLPPKIGLPHPLSAEKTPLN 470
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 354 LVLDSYFLRIEGLQAGIH*DLSAVRGSSGNDTVIRQCQ 467
L+L +++ +E L H D V S GNDT+ CQ
Sbjct: 11 LLLSNFWPTVESLNYKCHNDQILVVQSFGNDTIRMHCQ 48
>Z50739-2|CAA90602.2| 381|Caenorhabditis elegans Hypothetical
protein F13D2.3 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 215 KWVFGPAWTVLYSTWDMPLTSSGRNVMVLLKMQSYLS 325
+W +G W +Y W S N++ + + YLS
Sbjct: 96 EWKYGSLWCKMYRYWSSVAFFSNSNIVCGIALDRYLS 132
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 354 LVLDSYFLRIEGLQAGIH*DLSAVRGSSGNDTVIRQCQ 467
L+L +++ +E L H D V S GNDT+ CQ
Sbjct: 11 LLLSNFWPTVESLNYKCHNDQILVVQSFGNDTIRMHCQ 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,058,617
Number of Sequences: 27780
Number of extensions: 421513
Number of successful extensions: 1048
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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