BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0828 (735 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical pr... 58 5e-09 Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 33 0.21 Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 33 0.21 U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 30 2.0 AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical ... 30 2.0 AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 30 2.0 AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical ... 29 2.6 AF036700-4|AAV34787.1| 437|Caenorhabditis elegans Hypothetical ... 29 4.5 AF036700-3|AAB88366.2| 479|Caenorhabditis elegans Hypothetical ... 29 4.5 Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 28 7.9 Z50739-2|CAA90602.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.9 Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 28 7.9 >Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical protein C41G7.3 protein. Length = 553 Score = 58.4 bits (135), Expect = 5e-09 Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 3/103 (2%) Frame = +1 Query: 208 SPK-VGIWSSLDC-SLQHMGYASYLIWEECDGFT-EDAVLPLTLYGVQLLLNWSWTPIFF 378 +PK V ++S++D +L +GYASYL+++ GF D L L LYG + L + PI Sbjct: 431 APKDVRVYSAVDLLTLSPLGYASYLVYKNGGGFDYNDTKLALGLYGASVTLAVATIPIV- 489 Query: 379 GLKDFKLAFIEISVLSGAAVATTLSFGSVNKTAGLLLIPYLAW 507 K+ + +V+S A A + +F ++K AGLL++P+ W Sbjct: 490 KKKELGCLWKNTTVVSLTAAAASFAFYKIDKKAGLLVVPFAVW 532 >Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein C47E8.8 protein. Length = 1675 Score = 33.1 bits (72), Expect = 0.21 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -2 Query: 461 LPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVKPSHSS 282 LP D V + D E++ S KS P++IG D SSS +VR R PS + Sbjct: 878 LPEDPVSVQSRSDVCEVTAETSQKSVGPERIG-GDAQSSSENTVSVRNRVDLHGIPSKTP 936 Query: 281 Q 279 Q Sbjct: 937 Q 937 >Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical protein C47E8.8 protein. Length = 1675 Score = 33.1 bits (72), Expect = 0.21 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -2 Query: 461 LPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVKPSHSS 282 LP D V + D E++ S KS P++IG D SSS +VR R PS + Sbjct: 878 LPEDPVSVQSRSDVCEVTAETSQKSVGPERIG-GDAQSSSENTVSVRNRVDLHGIPSKTP 936 Query: 281 Q 279 Q Sbjct: 937 Q 937 >U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical protein D1014.7 protein. Length = 492 Score = 29.9 bits (64), Expect = 2.0 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%) Frame = +2 Query: 317 YLSHCTEYS--CYSTGLGL----LF---SSD*RTSSWHSLRSQCCPGQQWQRHCHSAVSI 469 Y +H TE++ ++ L L LF SS+ W+ +R+ P RH A+ I Sbjct: 42 YFTHTTEFNKNIHNAPLSLRENTLFAFNSSNCPYKEWNQIRTDSIPNAN--RHADWAIQI 99 Query: 470 RQPVCYSYHT 499 ++P Y YHT Sbjct: 100 KKPSKYLYHT 109 >AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical protein H24G06.1d protein. Length = 669 Score = 29.9 bits (64), Expect = 2.0 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 3/93 (3%) Frame = -2 Query: 542 PDVVRKGAGISGQAKYGMSNK---PAVLLTLPNDSVVATAAPDSTEISMNASLKSFNPKK 372 P V + ++ Q SN A L +P S + PD + + +S +P K Sbjct: 158 PKTVWSPSALANQGAPRRSNSNLFAATNLEVPPTSTNLSRRPDDLNFASSLRSRSQSPNK 217 Query: 371 IGVQDQLSSSCTPYNVRGRTASSVKPSHSSQMR 273 + ++S TP + T SS+ + Q R Sbjct: 218 FALSQMINSRDTPSSPSSTTGSSIVGRNLQQRR 250 >AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical protein H24G06.1b protein. Length = 1601 Score = 29.9 bits (64), Expect = 2.0 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 3/93 (3%) Frame = -2 Query: 542 PDVVRKGAGISGQAKYGMSNK---PAVLLTLPNDSVVATAAPDSTEISMNASLKSFNPKK 372 P V + ++ Q SN A L +P S + PD + + +S +P K Sbjct: 1090 PKTVWSPSALANQGAPRRSNSNLFAATNLEVPPTSTNLSRRPDDLNFASSLRSRSQSPNK 1149 Query: 371 IGVQDQLSSSCTPYNVRGRTASSVKPSHSSQMR 273 + ++S TP + T SS+ + Q R Sbjct: 1150 FALSQMINSRDTPSSPSSTTGSSIVGRNLQQRR 1182 >AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical protein H24G06.1e protein. Length = 543 Score = 29.5 bits (63), Expect = 2.6 Identities = 17/68 (25%), Positives = 29/68 (42%) Frame = -2 Query: 476 AVLLTLPNDSVVATAAPDSTEISMNASLKSFNPKKIGVQDQLSSSCTPYNVRGRTASSVK 297 A L +P S + PD + + +S +P K + ++S TP + T SS+ Sbjct: 57 ATNLEVPPTSTNLSRRPDDLNFASSLRSRSQSPNKFALSQMINSRDTPSSPSSTTGSSIV 116 Query: 296 PSHSSQMR 273 + Q R Sbjct: 117 GRNLQQRR 124 >AF036700-4|AAV34787.1| 437|Caenorhabditis elegans Hypothetical protein M04G7.3b protein. Length = 437 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 Query: 410 SMNASLKSFNPKKIGVQDQLSSSCTPYN 327 S+N+S+K P KIG+ LS+ TP N Sbjct: 401 SLNSSMKKSLPPKIGLPHPLSAEKTPLN 428 >AF036700-3|AAB88366.2| 479|Caenorhabditis elegans Hypothetical protein M04G7.3a protein. Length = 479 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 Query: 410 SMNASLKSFNPKKIGVQDQLSSSCTPYN 327 S+N+S+K P KIG+ LS+ TP N Sbjct: 443 SLNSSMKKSLPPKIGLPHPLSAEKTPLN 470 >Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical protein T05C12.10 protein. Length = 1169 Score = 27.9 bits (59), Expect = 7.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +3 Query: 354 LVLDSYFLRIEGLQAGIH*DLSAVRGSSGNDTVIRQCQ 467 L+L +++ +E L H D V S GNDT+ CQ Sbjct: 11 LLLSNFWPTVESLNYKCHNDQILVVQSFGNDTIRMHCQ 48 >Z50739-2|CAA90602.2| 381|Caenorhabditis elegans Hypothetical protein F13D2.3 protein. Length = 381 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/37 (27%), Positives = 17/37 (45%) Frame = +2 Query: 215 KWVFGPAWTVLYSTWDMPLTSSGRNVMVLLKMQSYLS 325 +W +G W +Y W S N++ + + YLS Sbjct: 96 EWKYGSLWCKMYRYWSSVAFFSNSNIVCGIALDRYLS 132 >Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical protein T05C12.10 protein. Length = 1169 Score = 27.9 bits (59), Expect = 7.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +3 Query: 354 LVLDSYFLRIEGLQAGIH*DLSAVRGSSGNDTVIRQCQ 467 L+L +++ +E L H D V S GNDT+ CQ Sbjct: 11 LLLSNFWPTVESLNYKCHNDQILVVQSFGNDTIRMHCQ 48 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,058,617 Number of Sequences: 27780 Number of extensions: 421513 Number of successful extensions: 1048 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1006 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1047 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1724918872 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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