BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0828 (735 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g65560.1 68418.m08249 pentatricopeptide (PPR) repeat-containi... 31 1.0 At1g11340.1 68414.m01302 S-locus lectin protein kinase family pr... 30 1.8 At2g23610.1 68415.m02817 esterase, putative similar to ethylene-... 29 2.4 At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 29 4.2 At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF... 29 4.2 At5g27970.1 68418.m03369 expressed protein 28 7.4 At3g30280.1 68416.m03824 transferase family protein similar to d... 27 9.8 >At5g65560.1 68418.m08249 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 915 Score = 30.7 bits (66), Expect = 1.0 Identities = 23/73 (31%), Positives = 35/73 (47%) Frame = -2 Query: 668 LMKSNYYLFEINTFSYIYI*GIKQNIPLSGSLLSLHRFRIVLPDVVRKGAGISGQAKYGM 489 LM+S T++ + K N+ + +L+ R VLPDVV + I GQ + G Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477 Query: 488 SNKPAVLLTLPND 450 + LL+L ND Sbjct: 478 FDSAYRLLSLMND 490 >At1g11340.1 68414.m01302 S-locus lectin protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains S-locus glycoprotein family domain, Pfam:PF00954 Length = 901 Score = 29.9 bits (64), Expect = 1.8 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = -2 Query: 179 TRTFHC-CLYGFDPQRTVHWPIHRHLGG*SNRVQAN 75 ++TF C CL GF+P+ HW + GG + + +A+ Sbjct: 369 SKTFECTCLPGFEPKFPRHWFLRDSSGGCTKKKRAS 404 >At2g23610.1 68415.m02817 esterase, putative similar to ethylene-induced esterase [Citrus sinensis] GI:14279437, polyneuridine aldehyde esterase [Rauvolfia serpentina] GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family Length = 263 Score = 29.5 bits (63), Expect = 2.4 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%) Frame = +2 Query: 134 FFAGQIRKDNSEKSWYDEL---KKPSWTPPKWVFGP 232 F ++RK+ S + W D + +KP + W+FGP Sbjct: 121 FVWDKLRKETSREEWLDTVFTSEKPDFPSEFWIFGP 156 >At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. Length = 843 Score = 28.7 bits (61), Expect = 4.2 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -2 Query: 620 IYI*GIKQNIPLSGSLLSLHRFRIVLPDVVRKGAGISGQAK 498 IY+ G+K + G+L SLH+ +V D+ G G+ + Sbjct: 685 IYLEGLKVSFAAIGTLSSLHKLEMVNCDITESGTEWEGKRR 725 >At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF02984: Cyclin, C-terminal domain Length = 1025 Score = 28.7 bits (61), Expect = 4.2 Identities = 23/81 (28%), Positives = 36/81 (44%) Frame = +2 Query: 137 FAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSTWDMPLTSSGRNVMVLLKMQS 316 F+ + D+S+ +E + S ++ YSTW+ PLTS N + LL + Sbjct: 566 FSSMLTSDHSQNGMPEEERGSSTGEILDRLKSSYRQAYSTWNQPLTSVVDNSVDLLNSEL 625 Query: 317 YLSHCTEYSCYSTGLGLLFSS 379 + H S +GLL SS Sbjct: 626 DVVH---IRLSSHQIGLLLSS 643 >At5g27970.1 68418.m03369 expressed protein Length = 1629 Score = 27.9 bits (59), Expect = 7.4 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%) Frame = -2 Query: 590 PLSGSLLSLHRFRIVLP-DVVRKG---AGISGQAKYGMSNKPAVLLTLPNDSVVAT 435 PL+ L SL +F IVLP DV RK + +S +++ + K ++LT N + T Sbjct: 570 PLNSFLASLCKFTIVLPTDVERKSVVQSPVSKRSEVQVDLKDVIVLTPKNVQALRT 625 >At3g30280.1 68416.m03824 transferase family protein similar to deacetylvindoline 4-O-acetyltransferase [Catharanthus roseus][GI:4091808][PMID:9681034], alcohol acyltransferase [Fragaria x ananassa][GI:10121328][PMID:10810141] Length = 443 Score = 27.5 bits (58), Expect = 9.8 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%) Frame = -3 Query: 235 SWTKYPL------WGSPAWLL*LIIPGLFTVVFTDLTRKEQSIGPSTDIWEDN 95 SW K PL WGSP W+ + P L V ++ Q I + E+N Sbjct: 369 SWCKLPLYEASFGWGSPVWIAGNVAPMLENVTMLIDSKDGQGIEAFVTLPEEN 421 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,148,894 Number of Sequences: 28952 Number of extensions: 397536 Number of successful extensions: 1003 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 976 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1003 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1614253080 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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