Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0827
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    28   0.033
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   1.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   2.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   2.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   2.9  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    20   6.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.9 bits (59), Expect = 0.033
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 240  EVFP*GESRRAPSAGPMLPVXAVTXXTSRTV 332
            E  P   S  APS  PM+P   VT  TSR +
Sbjct: 2283 ECHPDASSTMAPSTTPMVPDKPVTTTTSRPI 2313


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 194 RLDSAEYCQAQHKXTGSVSVRREQESAIRWTHAAGXG 304
           R D A+Y    HK    +  R  +E ++  T+ A  G
Sbjct: 471 RKDEADYKDKLHKVAPRIKERMMKEGSMMVTYQAQKG 507


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 212 TPRCPSGTPSMSPQKGSPDTSA 147
           TP+      SMSPQ  S + SA
Sbjct: 150 TPKTSPNEASMSPQSTSSNNSA 171


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 212 TPRCPSGTPSMSPQKGSPDTSA 147
           TP+      SMSPQ  S + SA
Sbjct: 170 TPKTSPNEASMSPQSTSSNNSA 191


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -2

Query: 284 SSGWRSPALASRKHFLXICVEPGSTPRCPSGTPSMSPQ 171
           + G+R    +S K    +   P S     S TPS  PQ
Sbjct: 197 AKGFRENGKSSAKRKQLVSEHPDSPNSKKSATPSPPPQ 234


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 291 AWVQRMALSCSRLTETLPVXLC*AWQYSALSKRNS 187
           A  ++  L+C R+   L   LC   + + LS RN+
Sbjct: 58  AQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNT 92


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 209 PRCPSGTPSMS 177
           PRCPSG   +S
Sbjct: 96  PRCPSGESMLS 106


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 221 PGSTPRCPSGTPSMSPQKGSPDTSARQ 141
           P +   CP    S +PQ GS  T   Q
Sbjct: 167 PANEISCPQVQWSATPQAGSTPTYQTQ 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,504
Number of Sequences: 336
Number of extensions: 1112
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)