BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0827
(357 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 22 6.0
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 22 7.9
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 139 FCLAEVSGDPFC 174
FC+AEV+G FC
Sbjct: 72 FCIAEVNGVFFC 83
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 222 AWQYSALSKRNSINVXTEGISRYF 151
A + L+KR + + EG+ R+F
Sbjct: 226 ATTFKGLAKRIGMKLTDEGVERFF 249
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,018
Number of Sequences: 2352
Number of extensions: 5135
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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