Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0827
(357 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093406-1|AAH93406.1| 581|Homo sapiens LAMA3 protein protein. 31 1.0
BC033663-1|AAH33663.1| 401|Homo sapiens LAMA3 protein protein. 31 1.0
AY327116-1|AAQ72571.1| 3277|Homo sapiens laminin alpha 3 splice ... 31 1.0
AY327115-1|AAQ72570.1| 3333|Homo sapiens laminin alpha 3 splice ... 31 1.0
AF005258-1|AAC51867.1| 1486|Homo sapiens laminin alpha 3b chain ... 31 1.0
AB107369-1|BAD13428.1| 3333|Homo sapiens laminin alpha 3b chain ... 31 1.0
AK092627-1|BAC03928.1| 235|Homo sapiens protein ( Homo sapiens ... 29 5.6
U66464-1|AAB97983.1| 833|Homo sapiens hematopoietic progenitor ... 28 7.4
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 28 7.4
Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding p... 28 9.8
>BC093406-1|AAH93406.1| 581|Homo sapiens LAMA3 protein protein.
Length = 581
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 112 NFSFVL-LTLFCLAEVSG-DPFCGDIDGVPLGQRGVLPGSTQXNRKCFREARAGERHPLD 285
NF F L + +F ++ S DP GDI G GVLP + +C R G P
Sbjct: 463 NFPFCLRIPIFPVSTPSSEDPVAGDIKGCDCNLEGVLPEICDAHGRCL--CRPGVEGPRC 520
Query: 286 PCCR 297
CR
Sbjct: 521 DTCR 524
>BC033663-1|AAH33663.1| 401|Homo sapiens LAMA3 protein protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 112 NFSFVL-LTLFCLAEVSG-DPFCGDIDGVPLGQRGVLPGSTQXNRKCFREARAGERHPLD 285
NF F L + +F ++ S DP GDI G GVLP + +C R G P
Sbjct: 282 NFPFCLRIPIFPVSTPSSEDPVAGDIKGCDCNLEGVLPEICDAHGRCL--CRPGVEGPRC 339
Query: 286 PCCR 297
CR
Sbjct: 340 DTCR 343
>AY327116-1|AAQ72571.1| 3277|Homo sapiens laminin alpha 3 splice
variant b2 protein.
Length = 3277
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 112 NFSFVL-LTLFCLAEVSG-DPFCGDIDGVPLGQRGVLPGSTQXNRKCFREARAGERHPLD 285
NF F L + +F ++ S DP GDI G GVLP + +C R G P
Sbjct: 463 NFPFCLRIPIFPVSTPSSEDPVAGDIKGCDCNLEGVLPEICDAHGRCL--CRPGVEGPRC 520
Query: 286 PCCR 297
CR
Sbjct: 521 DTCR 524
>AY327115-1|AAQ72570.1| 3333|Homo sapiens laminin alpha 3 splice
variant b1 protein.
Length = 3333
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 112 NFSFVL-LTLFCLAEVSG-DPFCGDIDGVPLGQRGVLPGSTQXNRKCFREARAGERHPLD 285
NF F L + +F ++ S DP GDI G GVLP + +C R G P
Sbjct: 463 NFPFCLRIPIFPVSTPSSEDPVAGDIKGCDCNLEGVLPEICDAHGRCL--CRPGVEGPRC 520
Query: 286 PCCR 297
CR
Sbjct: 521 DTCR 524
>AF005258-1|AAC51867.1| 1486|Homo sapiens laminin alpha 3b chain
protein.
Length = 1486
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 112 NFSFVL-LTLFCLAEVSG-DPFCGDIDGVPLGQRGVLPGSTQXNRKCFREARAGERHPLD 285
NF F L + +F ++ S DP GDI G GVLP + +C R G P
Sbjct: 426 NFPFCLRIPIFPVSTPSSEDPVAGDIKGCDCNLEGVLPEICDAHGRCL--CRPGVEGPRC 483
Query: 286 PCCR 297
CR
Sbjct: 484 DTCR 487
>AB107369-1|BAD13428.1| 3333|Homo sapiens laminin alpha 3b chain
protein.
Length = 3333
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 112 NFSFVL-LTLFCLAEVSG-DPFCGDIDGVPLGQRGVLPGSTQXNRKCFREARAGERHPLD 285
NF F L + +F ++ S DP GDI G GVLP + +C R G P
Sbjct: 463 NFPFCLRIPIFPVSTPSSEDPVAGDIKGCDCNLEGVLPEICDAHGRCL--CRPGVEGPRC 520
Query: 286 PCCR 297
CR
Sbjct: 521 DTCR 524
>AK092627-1|BAC03928.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ35308 fis, clone PROST2009909, weakly similar to
ADAM 12 PRECURSOR (EC 3.4.24.-). ).
Length = 235
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 190 VPLGQRGVLPGSTQXNRKCFREARAGERHPLDPCCR 297
+P RG+ PG R C + R G+R PL CR
Sbjct: 136 LPPSSRGLFPGGELCGR-CSWKLRPGQRGPLPALCR 170
>U66464-1|AAB97983.1| 833|Homo sapiens hematopoietic progenitor
kinase protein.
Length = 833
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 227 VEPGSTPRCPSGTPSMSPQKGSPDTSA 147
+ PG RC SG P SP+ G P +++
Sbjct: 420 LSPGVLVRCASGPPPNSPRPGPPPSTS 446
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 221 PGSTPRCPSGTPSMSPQKGSPD 156
P P PSG PS+SPQ PD
Sbjct: 332 PEELPLSPSGEPSLSPQLMPPD 353
>Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding
protein-4 protein.
Length = 1587
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 249 P*GESRRAPSAGPMLPVXAVTXXTSRTVPHTYPSS 353
P E R P GP LP+ ++ T +P + PSS
Sbjct: 475 PRPEPRPDPRPGPELPLPSIPAWTGPEIPESGPSS 509
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,617,028
Number of Sequences: 237096
Number of extensions: 778430
Number of successful extensions: 2727
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2725
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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