Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0827
         (357 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   7.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   7.6  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 283 PADGALLLSPHGNTSCXFVLSLAVLRAVQAELH 185
           P DGAL+L  + +      + + +++ V  +LH
Sbjct: 126 PEDGALILHYYSDRPGLEHIVIGIVKTVAKKLH 158


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 283 PADGALLLSPHGNTSCXFVLSLAVLRAVQAELH 185
           P DGAL+L  + +      + + +++ V  +LH
Sbjct: 126 PEDGALILHYYSDRPGLEHIVIGIVKTVAKKLH 158


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -2

Query: 332 NSARGAXSHRRYRQHGSSGW 273
           N++RG         HGS  W
Sbjct: 392 NNSRGHSGQSSSHHHGSKSW 411


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 200 PSGTPSMSPQKGSPDTSA 147
           P+ TP  S + G P ++A
Sbjct: 889 PASTPGCSSKNGEPTSAA 906


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 215 STPRCPSGTPSMSPQKGSPDT 153
           ++PR P+ +PS + Q  S  T
Sbjct: 736 ASPRSPNASPSPAEQCASTTT 756


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 218 GSTPRCPSGTPSMSPQKGSP 159
           GS+P    G  +M P  G P
Sbjct: 331 GSSPHHQHGNHTMGPTMGPP 350


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,154
Number of Sequences: 438
Number of extensions: 1427
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)