BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0826 (653 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.0 SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 28 1.4 SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 27 1.8 SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 27 3.1 SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 26 4.1 SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 26 4.1 SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.2 SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces po... 25 7.2 SPAC1B2.03c |||GNS1/SUR4 family protein|Schizosaccharomyces pomb... 25 9.5 >SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1611 Score = 28.3 bits (60), Expect = 1.0 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Frame = -2 Query: 238 SSSNAPFAPASVPVARA----IPCSSNVFSKIAPTNQLPCPRPYISSSTV 101 SSS AP AP VP + IP S AP+ P P+P +++ V Sbjct: 1055 SSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPV 1104 >SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1288 Score = 27.9 bits (59), Expect = 1.4 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = +1 Query: 286 NVPIRSNNLFLAKMN-ICLQQHEDKAPPTTRHMRFSFLLQAKYERISG 426 N+PI + L+ +N H D+ +R R S ++ A ++R+SG Sbjct: 112 NIPISYRDNLLSHVNGYARSMHNDRKVRASRSRRISGMILAHFKRLSG 159 >SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 873 Score = 27.5 bits (58), Expect = 1.8 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Frame = -2 Query: 232 SNAPFAPASVPVARAIPCSSNVFSK-IAPTNQLPCPRPYIS 113 ++A F P+S+P + +I SSN F K AP N+ P P+I+ Sbjct: 236 ADAAFKPSSLP-STSISASSNAFYKPAAPDNERPLD-PHIT 274 >SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 731 Score = 26.6 bits (56), Expect = 3.1 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = -2 Query: 238 SSSNAPFAPASVPVARAIPCSSNVFSKIAPTNQLPCPRPYISSST 104 SS N PF+P + RA P + S TN P I++ T Sbjct: 676 SSQNLPFSPMKISPIRASPVKTIPSSPSPTTNIFSAPLNNITNCT 720 >SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosaccharomyces pombe|chr 2|||Manual Length = 658 Score = 26.2 bits (55), Expect = 4.1 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Frame = -2 Query: 238 SSSNAPFAPASVPVARAI--PCSSNVFSKIAPTNQLPCPRPYISSSTVDNFI 89 SS P PA P A + P S+ K +N P P +SS + DN I Sbjct: 248 SSRLYPSRPAPTPPASSSSSPLLSSQTVKTTTSNASRQPSPLVSSKSTDNII 299 >SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizosaccharomyces pombe|chr 2|||Manual Length = 551 Score = 26.2 bits (55), Expect = 4.1 Identities = 16/77 (20%), Positives = 32/77 (41%) Frame = +1 Query: 292 PIRSNNLFLAKMNICLQQHEDKAPPTTRHMRFSFLLQAKYERISGLAAVLLLSMDASDQP 471 P S+ + K + ++H +K P R +S + KY+ SG+ + + + Sbjct: 125 PQESSEKYSKKSSTRKKEHFNKKPSFPRDTEYSHIYNMKYDPRSGI-GIRVKRQEPESLK 183 Query: 472 LSNPRADQFPEVKKHRK 522 N +D P+ +K Sbjct: 184 KENNNSDYLPKSAMKQK 200 >SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual Length = 4717 Score = 25.4 bits (53), Expect = 7.2 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -1 Query: 569 AACSYHKHNKQFYLSILRCFF 507 AAC+YH+ N+ + L I++ F Sbjct: 1717 AACNYHQVNEDWRLKIIKFMF 1737 >SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces pombe|chr 1|||Manual Length = 474 Score = 25.4 bits (53), Expect = 7.2 Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Frame = -2 Query: 583 YKHSLQPAVIISIINSFTFRFYGVFLPPETDQHVDYLEVGHWR----PWTTAIPQLSRRF 416 Y ++L+ ++ ++++ + ++PP + + EV R +IP++ + Sbjct: 358 YSYTLRRNYLLYAMDTYLPKSVCSYIPPVAGMFI-WFEVDKSRYIHADKNESIPEIESKI 416 Query: 415 FHTSLEEGMKTSCVAWWAALYPRV 344 ++EEG+ +C W+ + PRV Sbjct: 417 HAEAVEEGVNLACGNWF-VVDPRV 439 >SPAC1B2.03c |||GNS1/SUR4 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 334 Score = 25.0 bits (52), Expect = 9.5 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +1 Query: 124 DEDMEVDLWELFLRKHLKSMEWH 192 D VDLW LF + +K++ W+ Sbjct: 17 DHPFGVDLWHLFEQLSIKTIGWN 39 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,920,751 Number of Sequences: 5004 Number of extensions: 63583 Number of successful extensions: 187 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 187 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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