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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0826
         (653 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    28   1.0  
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo...    28   1.4  
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz...    27   1.8  
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos...    27   3.1  
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc...    26   4.1  
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo...    26   4.1  
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        25   7.2  
SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces po...    25   7.2  
SPAC1B2.03c |||GNS1/SUR4 family protein|Schizosaccharomyces pomb...    25   9.5  

>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -2

Query: 238  SSSNAPFAPASVPVARA----IPCSSNVFSKIAPTNQLPCPRPYISSSTV 101
            SSS AP AP  VP   +    IP  S      AP+   P P+P +++  V
Sbjct: 1055 SSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPV 1104


>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
           Swr1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1288

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 286 NVPIRSNNLFLAKMN-ICLQQHEDKAPPTTRHMRFSFLLQAKYERISG 426
           N+PI   +  L+ +N      H D+    +R  R S ++ A ++R+SG
Sbjct: 112 NIPISYRDNLLSHVNGYARSMHNDRKVRASRSRRISGMILAHFKRLSG 159


>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 873

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -2

Query: 232 SNAPFAPASVPVARAIPCSSNVFSK-IAPTNQLPCPRPYIS 113
           ++A F P+S+P + +I  SSN F K  AP N+ P   P+I+
Sbjct: 236 ADAAFKPSSLP-STSISASSNAFYKPAAPDNERPLD-PHIT 274


>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 731

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -2

Query: 238 SSSNAPFAPASVPVARAIPCSSNVFSKIAPTNQLPCPRPYISSST 104
           SS N PF+P  +   RA P  +   S    TN    P   I++ T
Sbjct: 676 SSQNLPFSPMKISPIRASPVKTIPSSPSPTTNIFSAPLNNITNCT 720


>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
           Shk1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 658

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = -2

Query: 238 SSSNAPFAPASVPVARAI--PCSSNVFSKIAPTNQLPCPRPYISSSTVDNFI 89
           SS   P  PA  P A +   P  S+   K   +N    P P +SS + DN I
Sbjct: 248 SSRLYPSRPAPTPPASSSSSPLLSSQTVKTTTSNASRQPSPLVSSKSTDNII 299


>SPBC1773.09c |mug184||meiotically upregulated gene
           Mug184|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 551

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 16/77 (20%), Positives = 32/77 (41%)
 Frame = +1

Query: 292 PIRSNNLFLAKMNICLQQHEDKAPPTTRHMRFSFLLQAKYERISGLAAVLLLSMDASDQP 471
           P  S+  +  K +   ++H +K P   R   +S +   KY+  SG+  + +   +     
Sbjct: 125 PQESSEKYSKKSSTRKKEHFNKKPSFPRDTEYSHIYNMKYDPRSGI-GIRVKRQEPESLK 183

Query: 472 LSNPRADQFPEVKKHRK 522
             N  +D  P+    +K
Sbjct: 184 KENNNSDYLPKSAMKQK 200


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 569  AACSYHKHNKQFYLSILRCFF 507
            AAC+YH+ N+ + L I++  F
Sbjct: 1717 AACNYHQVNEDWRLKIIKFMF 1737


>SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 474

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = -2

Query: 583 YKHSLQPAVIISIINSFTFRFYGVFLPPETDQHVDYLEVGHWR----PWTTAIPQLSRRF 416
           Y ++L+   ++  ++++  +    ++PP     + + EV   R        +IP++  + 
Sbjct: 358 YSYTLRRNYLLYAMDTYLPKSVCSYIPPVAGMFI-WFEVDKSRYIHADKNESIPEIESKI 416

Query: 415 FHTSLEEGMKTSCVAWWAALYPRV 344
              ++EEG+  +C  W+  + PRV
Sbjct: 417 HAEAVEEGVNLACGNWF-VVDPRV 439


>SPAC1B2.03c |||GNS1/SUR4 family protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 334

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 124 DEDMEVDLWELFLRKHLKSMEWH 192
           D    VDLW LF +  +K++ W+
Sbjct: 17  DHPFGVDLWHLFEQLSIKTIGWN 39


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,920,751
Number of Sequences: 5004
Number of extensions: 63583
Number of successful extensions: 187
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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