BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0826 (653 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0633 + 20120560-20123464,20123608-20123672 31 0.80 03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 31 1.1 03_02_0488 - 8824980-8825267,8825364-8827775 29 3.2 05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273,313... 28 5.6 12_01_1073 + 11135853-11137388,11137627-11137846,11137990-111381... 28 7.5 03_06_0340 + 33252677-33252864,33253086-33254442,33254565-332546... 28 7.5 01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942 27 9.9 >07_03_0633 + 20120560-20123464,20123608-20123672 Length = 989 Score = 31.1 bits (67), Expect = 0.80 Identities = 17/59 (28%), Positives = 27/59 (45%) Frame = -1 Query: 527 SILRCFFTSGN*SARGLLRGWSLASMDNSNTAAKPEILSYFA*RRNENLMCRVVGGALS 351 ++ + ++ N LLRGW S S T + +I+ FA + ENL + V S Sbjct: 195 TLAQLIYSDPNVKEAFLLRGWVFTSRSCSRTGLEQDIIESFASEQEENLQRKSVSSESS 253 >03_02_0910 + 12317493-12317960,12319678-12319734,12320592-12320666, 12321219-12321299,12321472-12321546,12321818-12321862, 12321975-12322064,12322153-12322254,12322366-12322420, 12324966-12325027,12325521-12325555,12325877-12326115, 12326219-12328035 Length = 1066 Score = 30.7 bits (66), Expect = 1.1 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -2 Query: 244 ICSSSNAPFAPASVPVARAIPCSSNVFSKIAPTNQLPCPRP 122 +CS + P PA P P N+ K APT + PCP P Sbjct: 1 MCSCARFPH-PALQPAPAPAPPPPNLKPKPAPTTRGPCPSP 40 >03_02_0488 - 8824980-8825267,8825364-8827775 Length = 899 Score = 29.1 bits (62), Expect = 3.2 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +3 Query: 258 HTIHRCYEVERAYPFKQFIFSENEHLPSTTRG*SAAHHATHE--VFIPSSSE 407 H RCY+ E+ + ++F+ +E LPS+ S H + E FI + S+ Sbjct: 636 HRKSRCYQAEKNHLHREFVLVGSEQLPSSEE--SGDSHVSREFAAFISAVSQ 685 >05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273, 3133136-3133305,3134655-3134771,3134980-3135166 Length = 482 Score = 28.3 bits (60), Expect = 5.6 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Frame = +3 Query: 228 LLDEHMAPM---PHTIHRCYEVERAYPFKQFIFSENEHLPSTTRG*SAAHHATHEVFIPS 398 + EH+A + P H C V +P S + H+P T A H H + PS Sbjct: 200 MFTEHVAAVSSAPGAAHPCPYVAYLHPLPSLASSSSSHVPERTMDGPAYHDPWHPLAGPS 259 >12_01_1073 + 11135853-11137388,11137627-11137846,11137990-11138178, 11138257-11138457,11138547-11139246,11163479-11164106 Length = 1157 Score = 27.9 bits (59), Expect = 7.5 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = -2 Query: 565 PAVIISIINSFTFRFYGVFLPPETDQHVDYLEVGHWRPWTTAIPQL 428 P II I+S +R LPP H D VG W+P+T P++ Sbjct: 1042 PYQIIECISSVAYRRC---LPPGAHLH-DVFHVGLWKPFTGVPPEV 1083 >03_06_0340 + 33252677-33252864,33253086-33254442,33254565-33254667, 33256081-33256171,33257208-33257300,33258316-33258471, 33258583-33258655 Length = 686 Score = 27.9 bits (59), Expect = 7.5 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -2 Query: 463 HWRPWTTAIPQLSRRFFHTSLEEGMKT 383 HW+P + + RFFH+SL++ M+T Sbjct: 568 HWQPNRQQLTEF--RFFHSSLQQSMET 592 >01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942 Length = 1020 Score = 27.5 bits (58), Expect = 9.9 Identities = 15/53 (28%), Positives = 23/53 (43%) Frame = +1 Query: 292 PIRSNNLFLAKMNICLQQHEDKAPPTTRHMRFSFLLQAKYERISGLAAVLLLS 450 P N FL ++N+ Q + PP +R +L + ISG+ L S Sbjct: 86 PAVGNLTFLRRLNLSSNQLHGEIPPAVGRLRRLLVLDMDHNSISGVIPANLSS 138 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,914,956 Number of Sequences: 37544 Number of extensions: 415309 Number of successful extensions: 972 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 942 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 972 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1632177336 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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